RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RNF115Q9Y4L5 304 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 FLVCR1Q9Y5Y0 555 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 A0A1B0GWA3 101 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 PRORSD1PA6NEY8 169 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 ARHGEF9O43307 516 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 KRT33AO76009 404 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 OPN1SWP03999 348 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 PTNP21246 168 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 HTR2AP28223 471 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 RGS8P57771 180 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-204ENST00000486023 IL1RL1Q01638 556 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 BSPH1Q075Z2 132 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 SLC17A1Q14916 467 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 MMEL1Q495T6 779 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 NCMAPQ5T1S8 102 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 TSPO2Q5TGU0 170 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 METTL21CQ5VZV1 264 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 C11orf65Q8NCR3 313 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 OR9K2Q8NGE7 335 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 KTI12Q96EK9 354 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-204ENST00000486023 SLC7A10Q9NS82 523 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 SELENONQ9NZV5 590 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 LAMP3Q9UQV4 416 aa15.57■□□□□ 0.08
COL6A1-204ENST00000486023 DPRXA6NFQ7 191 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 OR5H1A6NKK0 313 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 HS3ST1O14792 307 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 CNOT4O95628 575 aaKnown RBP15.56■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF83P51522 516 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 DMTNQ08495 405 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 ALG10BQ5I7T1 473 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 Q5PR19 223 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 TIMM23BQ5SRD1 257 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 ADAM5Q6NVV9 412 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 DHRS4L2Q6PKH6 230 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 DPP10Q8N608 796 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 KBTBD8Q8NFY9 601 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 OR10A6Q8NH74 314 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 STK35Q8TDR2 534 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM171Q8WVE6 324 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 STON2Q8WXE9 905 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 USB1Q9BQ65 265 aaKnown RBP15.56■□□□□ 0.08
COL6A1-204ENST00000486023 WFDC6Q9BQY6 131 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 TRIM2Q9C040 744 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM27Q9HBJ8 222 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
COL6A1-204ENST00000486023 LOC100653049A0A140TA62 436 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 AQP7P3A6NL99 342 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 M0QX08 132 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 KRT34O76011 436 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 COX5AP20674 150 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 HOXC12P31275 282 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 PTOV1Q86YD1 416 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-204ENST00000486023 C10orf53Q8N6V4 93 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 ZIC4Q8N9L1 334 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 VANGL1Q8TAA9 524 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-204ENST00000486023 SLC26A7Q8TE54 656 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 SEC14L4Q9UDX3 406 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 FREM1Q5H8C1 2179 aa15.55■□□□□ 0.08
COL6A1-204ENST00000486023 MTORP42345 2549 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM229AB2RXF0 380 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 M0R1B8 84 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 M0R3H8 397 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 FBP2O00757 339 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 MFN2O95140 757 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 EGR4Q05215 589 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 LGALS3BPQ08380 585 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 KLF10Q13118 480 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 CYLC2Q14093 348 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-204ENST00000486023 OR1Q1Q15612 314 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 GABRA6Q16445 453 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 SHEQ5VZ18 495 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 CGB2Q6NT52 195 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 NIPAL3Q6P499 406 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 ULK3Q6PHR2 472 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 CREB3L2Q70SY1 520 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 LILRB1Q8NHL6 650 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-204ENST00000486023 MFSD8Q8NHS3 518 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 DNAJA4Q8WW22 397 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-204ENST00000486023 TAAR8Q969N4 342 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 SLC35B4Q969S0 331 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 SLC47A1Q96FL8 570 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 PIP5K1AQ99755 562 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM204Q9BSN7 226 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 SF3B5Q9BWJ5 86 aaKnown RBP15.54■□□□□ 0.08
COL6A1-204ENST00000486023 GSX1Q9H4S2 264 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-204ENST00000486023 NPAP1Q9NZP6 1156 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 GMEB1Q9Y692 573 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 ROS1P08922 2347 aa15.54■□□□□ 0.08
COL6A1-204ENST00000486023 VPS13CQ709C8 3753 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 SETD2Q9BYW2 2564 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 ABCD4O14678 606 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 NPIPB7O75200 414 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 ITGA5P08648 1049 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 PNMTP11086 282 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 SELENOPP49908 381 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 C1DQ13901 141 aaKnown RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 DUSP7Q16829 419 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 OR7E24Q6IFN5 339 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms