RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 DCTN4Q9UJW0 460 aa11.65□□□□□ -0.54
UBA3-210ENST00000485424 GDF2Q9UK05 429 aaPredicted RBP11.65□□□□□ -0.54
UBA3-210ENST00000485424 FLVCR1Q9Y5Y0 555 aa11.65□□□□□ -0.54
UBA3-210ENST00000485424 GPR45Q9Y5Y3 372 aa11.65□□□□□ -0.54
UBA3-210ENST00000485424 SLC25A15Q9Y619 301 aa11.65□□□□□ -0.54
UBA3-210ENST00000485424 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 RNF212BA8MTL3 300 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 AKR7A3O95154 331 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 CD8AP01732 235 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 IMPDH2P12268 514 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 RPS4Y1P22090 263 aaKnown RBP11.64□□□□□ -0.55
UBA3-210ENST00000485424 GTF2E2P29084 291 aaKnown RBP11.64□□□□□ -0.55
UBA3-210ENST00000485424 TTKP33981 857 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 PRPS1P60891 318 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 CHRNB3Q05901 458 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 CEACAM7Q14002 265 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 MPP2Q14168 576 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 GABRA6Q16445 453 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 PDCD4Q53EL6 469 aaKnown RBP11.64□□□□□ -0.55
UBA3-210ENST00000485424 C6orf10Q5SRN2 563 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 WBP2NLQ6ICG8 309 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 HIPK1Q86Z02 1210 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
UBA3-210ENST00000485424 ITCHQ96J02 903 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 MUS81Q96NY9 551 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 YAE1D1Q9NRH1 226 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 ADPRHL2Q9NX46 363 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 THUMPD1Q9NXG2 353 aaKnown RBP11.64□□□□□ -0.55
UBA3-210ENST00000485424 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 B3GALT5Q9Y2C3 310 aa11.64□□□□□ -0.55
UBA3-210ENST00000485424 E7EQL1 145 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 ITGA5P08648 1049 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 GKN3PP0CG01 181 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 ETFAP13804 333 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 MPGP29372 298 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 DSCR9P59020 149 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 H3F3AP84243 136 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 SLC17A1Q14916 467 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 TNFAIP8L3Q5GJ75 292 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 PODNL1Q6PEZ8 512 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 VRK2Q86Y07 508 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 TMEM99Q8N816 258 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 POMGNT2Q8NAT1 580 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 SF3B5Q9BWJ5 86 aaKnown RBP11.63□□□□□ -0.55
UBA3-210ENST00000485424 RAD21L1Q9H4I0 556 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 MANSC1Q9H8J5 431 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 TPT1P8Q9HAU6 139 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 SLC17A5Q9NRA2 495 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 SLC7A10Q9NS82 523 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 RLIMQ9NVW2 624 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 RPS6KB2Q9UBS0 482 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 PRDM4Q9UKN5 801 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 ZNF443Q9Y2A4 671 aaPredicted RBP11.63□□□□□ -0.55
UBA3-210ENST00000485424 IFT52Q9Y366 437 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 PMF1-BGLAPU3KQ54 211 aa11.63□□□□□ -0.55
UBA3-210ENST00000485424 A0A096LNT2 108 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 A0A096LPI6 279 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 ZC3H12DA2A288 527 aaKnown RBP11.62□□□□□ -0.55
UBA3-210ENST00000485424 CDHR4A6H8M9 788 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 A8MVM7 634 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 C5orf58C9J3I9 102 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 UBDO15205 165 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 ERLIN1O75477 346 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 IFNA2P01563 188 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 C1QCP02747 245 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
UBA3-210ENST00000485424 STX1BP61266 288 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 PLAURQ03405 335 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 TSPO2Q5TGU0 170 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 ZNF544Q6NX49 715 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 MSANTD1Q6ZTZ1 278 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 MIER2Q8N344 545 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 OR9K2Q8NGE7 335 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
UBA3-210ENST00000485424 TMEM45BQ96B21 275 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 ADAM19Q9H013 955 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 ZIM2Q9NZV7 527 aa11.62□□□□□ -0.55
UBA3-210ENST00000485424 A0A0G2JPF8 293 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 LIPT2A6NK58 231 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 AQP7P3A6NL99 342 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 HNRNPCL3B7ZW38 293 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 ZNF587BE7ETH6 402 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 SNNO75324 88 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 VAMP5O95183 116 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 AHSA1O95433 338 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 ZCCHC18P0CG32 403 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 HNRNPCL4P0DMR1 293 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 APOBEC3AP31941 199 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 NTF4P34130 210 aa11.61□□□□□ -0.55
UBA3-210ENST00000485424 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 UBE2NP61088 152 aaKnown RBP11.61□□□□□ -0.55
UBA3-210ENST00000485424 MAGOHP61326 146 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms