RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SPAG17Q6Q759 2223 aa3.92□□□□□ -1.78
SPTA1-206ENST00000484520 TNRC6BQ9UPQ9 1833 aaKnown RBP3.92□□□□□ -1.78
SPTA1-206ENST00000484520 GVINP1Q7Z2Y8 2422 aa3.92□□□□□ -1.78
SPTA1-206ENST00000484520 KMT2EQ8IZD2 1858 aa3.92□□□□□ -1.78
SPTA1-206ENST00000484520 FAM186AA6NE01 2351 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FRYLO94915 3013 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 VPS13AQ96RL7 3174 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TRAPPC13A5PLN9 417 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MAGEA13PA6NCF6 341 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SERINC4A6NH21 518 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SAC3D1A6NKF1 404 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SNTNA6NMZ2 147 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NPIPB9F8W1W9 429 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 hCG_2039718K7EN88 272 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PEX12O00623 359 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TP53I11O14683 189 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SLC16A6O15403 523 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 EIF4E2O60573 245 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MRPS14O60783 128 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 DNAJB6O75190 326 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 GCM2O75603 506 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 HPP00738 406 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 UBL4AP11441 157 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MYF6P23409 242 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 HTR3AP46098 478 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ERFP50548 548 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 GPR143P51810 404 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 UGT2B15P54855 530 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 AQP4P55087 323 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 CDH12P55289 794 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TPD52P55327 224 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NUP107P57740 925 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 EEF1A1P68104 462 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 BTG2P78543 158 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 VLDLRP98155 873 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TLE1Q04724 770 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PLCXD2Q0VAA5 305 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FUT5Q11128 374 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MERTKQ12866 999 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SNTA1Q13424 505 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 KEAP1Q14145 624 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FGFBP1Q14512 234 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 RAB39AQ14964 217 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 EXOSC7Q15024 291 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PCM1Q15154 2024 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MAPK11Q15759 364 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NPTX1Q15818 432 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 DUSP7Q16829 419 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SYT16Q17RD7 645 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 LRRC36Q1X8D7 754 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ANKDD1AQ495B1 522 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 KCTD21Q4G0X4 260 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SFT2D3Q587I9 215 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 VWA2Q5GFL6 755 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 OTUD3Q5T2D3 398 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 HES3Q5TGS1 186 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 LPCAT4Q643R3 524 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 KDM4DQ6B0I6 523 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 HMBOX1Q6NT76 420 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FAM180BQ6P0A1 224 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TMEM81Q6P7N7 255 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PAPD4Q6PIY7 484 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 OPN5Q6U736 354 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PLEKHM3Q6ZWE6 761 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MEPCEQ7L2J0 689 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NDUFAF7Q7L592 441 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NUP54Q7Z3B4 507 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 EPHX4Q8IUS5 362 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 CDK20Q8IZL9 346 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 C8orf59Q8N0T1 100 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FAM109AQ8N4B1 249 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SLC5A8Q8N695 610 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FAM86B1Q8N7N1 296 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 CLDN22Q8N7P3 220 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 BCORP1Q8N888 145 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 LSMEM1Q8N8F7 131 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ZNF441Q8N8Z8 693 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SMYD1Q8NB12 490 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 FAM71CQ8NEG0 241 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 GPR32P1Q8NGA4 272 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 OR10G2Q8NGC3 310 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 OR4C15Q8NGM1 316 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 PIGXQ8TBF5 258 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 MAGEE2Q8TD90 523 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ZNF721Q8TF20 911 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TRUB1Q8WWH5 349 aaKnown RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ACOT11Q8WXI4 607 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TSLPQ969D9 159 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 UCN3Q969E3 161 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ADIPOR1Q96A54 375 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SGCZQ96LD1 299 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 DGCR6LQ9BY27 220 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 ITPAQ9BY32 194 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 TBL1XR1Q9BZK7 514 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NMNAT1Q9HAN9 279 aaPredicted RBP3.91□□□□□ -1.78
SPTA1-206ENST00000484520 NTN4Q9HB63 628 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 VCX3AQ9NNX9 186 aa3.91□□□□□ -1.78
SPTA1-206ENST00000484520 SLC22A11Q9NSA0 550 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms