RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 NEGR1Q7Z3B1 354 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 KIAA1328Q86T90 577 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF713Q8N859 430 aaPredicted RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 ATP6V0D2Q8N8Y2 350 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 DENND6BQ8NEG7 585 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 SMARCD2Q92925 531 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 RAB17Q9H0T7 212 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 SUDS3Q9H7L9 328 aaPredicted RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 SIGLEC8Q9NYZ4 499 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 CARHSP1Q9Y2V2 147 aaKnown RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 FRMPD3Q5JV73 1810 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 IGKV3D-11A0A0A0MRZ8 115 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 RPL36A-HNRNPH2H7BZ11 118 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 VPS26AO75436 327 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 OR4F21O95013 312 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 TRIM16O95361 564 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 PGCP20142 388 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 TBXA2RP21731 343 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 KIR2DS4P43632 304 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 NAPAP54920 295 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 HSF2Q03933 536 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 KIAA0087Q14695 138 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 LRRC10Q5BKY1 277 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF311Q5JNZ3 666 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 TIGD3Q6B0B8 471 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 NANOGP8Q6NSW7 305 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 SNX32Q86XE0 403 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 ZFP90Q8TF47 636 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 MRPL38Q96DV4 380 aaKnown RBP1.69□□□□□ -2.14
SCAF11-207ENST00000484275 DNTTIP1Q9H147 329 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 DEFB127Q9H1M4 99 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 RNF167Q9H6Y7 350 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 FOLH1BQ9HBA9 442 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 VAT1LQ9HCJ6 419 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 ZFP14Q9HCL3 533 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 AATFQ9NY61 560 aaKnown RBP eCLIP1.69□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF226Q9NYT6 803 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 NID2Q14112 1375 aa1.69□□□□□ -2.14
SCAF11-207ENST00000484275 SPAG9O60271 1321 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 SH3TC1Q8TE82 1336 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 IGLV11-55A0A075B6I3 123 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 RBMY1BA6NDE4 496 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 RBMY1EA6NEQ0 496 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 RBMY1DP0C7P1 496 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 RBMY1A1P0DJD3 496 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 GDI1P31150 447 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 HPCAL1P37235 193 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 RABIFP47224 123 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 ARRB1P49407 418 aaPredicted RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 DAP3P51398 398 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 CNTN2Q02246 1040 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 PPP2R5CQ13362 524 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 ATP6AP1Q15904 470 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 OR2G6Q5TZ20 316 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 MISPQ8IVT2 679 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 MSANTD4Q8NCY6 345 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 OR4F15Q8NGB8 312 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 OR4K14Q8NGD5 310 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 LRRC58Q96CX6 371 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 SLC35A5Q9BS91 424 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 SMYD3Q9H7B4 428 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 SIAEQ9HAT2 523 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 QPCTLQ9NXS2 382 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF586Q9NXT0 402 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 NOL7Q9UMY1 257 aaKnown RBP1.68□□□□□ -2.14
SCAF11-207ENST00000484275 MGAT4BQ9UQ53 548 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 GSTK1Q9Y2Q3 226 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 CARMIL1Q5VZK9 1371 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
SCAF11-207ENST00000484275 CTAGE5O15320 804 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 RS1O15537 224 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 KIF5BP33176 963 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 MXD4Q14582 209 aaPredicted RBP1.67□□□□□ -2.14
SCAF11-207ENST00000484275 RFX4Q33E94 735 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 MARCH8Q5T0T0 291 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 CBLN3Q6UW01 205 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 SHISA6Q6ZSJ9 500 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 CATSPER4Q7RTX7 472 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 SLC26A11Q86WA9 606 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 OR4D9Q8NGE8 314 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 MYLPFQ96A32 169 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 C14orf79Q96F83 325 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 CMTM7Q96FZ5 175 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 BMFQ96LC9 184 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 NDFIP1Q9BT67 221 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 ALG12Q9BV10 488 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 NXF5Q9H1B4 397 aaKnown RBP1.67□□□□□ -2.14
SCAF11-207ENST00000484275 SRMSQ9H3Y6 488 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF222Q9UK12 451 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 SLC25A15Q9Y619 301 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 DOCK8Q8NF50 2099 aa1.67□□□□□ -2.14
SCAF11-207ENST00000484275 NSG1A0A0A6YYJ2 146 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 PLAC8L1A1L4L8 177 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 NEBLO76041 1014 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 PPIAL4GP0DN37 164 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 ANXA13P27216 316 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 SLC26A3P40879 764 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 HSD17B7P56937 341 aa1.66□□□□□ -2.14
SCAF11-207ENST00000484275 RIPK1Q13546 671 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms