RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 C1QTNF12Q5T7M4 302 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 TNFAIP8L2Q6P589 184 aaPredicted RBP11.13□□□□□ -0.63
UBR4-213ENST00000483922 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 EPHX4Q8IUS5 362 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 C4orf33Q8N1A6 199 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 POMGNT2Q8NAT1 580 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 NUP37Q8NFH4 326 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 NEU4Q8WWR8 484 aaPredicted RBP11.13□□□□□ -0.63
UBR4-213ENST00000483922 ROPN1LQ96C74 230 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 ZNF837Q96EG3 531 aaPredicted RBP11.13□□□□□ -0.63
UBR4-213ENST00000483922 SLC35G5Q96KT7 338 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 PPP3R2Q96LZ3 170 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 NAA11Q9BSU3 229 aaPredicted RBP11.13□□□□□ -0.63
UBR4-213ENST00000483922 MECRQ9BV79 373 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 RACGAP1Q9H0H5 632 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 EXOSC3Q9NQT5 275 aaKnown RBP11.13□□□□□ -0.63
UBR4-213ENST00000483922 TMEM45AQ9NWC5 275 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 WDR45Q9Y484 360 aa11.13□□□□□ -0.63
UBR4-213ENST00000483922 A0A0A6YYJ9 748 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 RNF103-CHMP3A0A140T963 221 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 AQP7P3A6NL99 342 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 SLCO1B7G3V0H7 640 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 PRPS1L1P21108 318 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 CLDN8P56748 225 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 BNIP2Q12982 314 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 MAPK11Q15759 364 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 ADRM1Q16186 407 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 SYPL1Q16563 259 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 WHAMMP3Q1A5X7 153 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 PGS1Q32NB8 556 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 BHLHB9Q6PI77 547 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 C16orf62Q7Z3J2 963 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 SPATA21Q7Z572 469 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 ARFGAP2Q8N6H7 521 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 NATD1Q8N6N6 113 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 CCDC63Q8NA47 563 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
UBR4-213ENST00000483922 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 ZNF442Q9H7R0 627 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
UBR4-213ENST00000483922 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 PCDHGB4Q9UN71 923 aa11.12□□□□□ -0.63
UBR4-213ENST00000483922 HMGN4O00479 90 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 CHEK2O96017 543 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 ADRA2AP08913 450 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 IFNGR1P15260 489 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 KRT4P19013 534 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 MAPK1P28482 360 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 SLC1A3P43003 542 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 POLR2HP52434 150 aaKnown RBP11.11□□□□□ -0.63
UBR4-213ENST00000483922 ARFIP2P53365 341 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 OR7A5Q15622 319 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 SAXO2Q658L1 398 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 KLHL24Q6TFL4 600 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 PEG10Q86TG7 708 aaKnown RBP11.11□□□□□ -0.63
UBR4-213ENST00000483922 ANKRD46Q86W74 232 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 KDM8Q8N371 416 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 ANKFN1Q8N957 763 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 FNDC5Q8NAU1 212 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 OR4F15Q8NGB8 312 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 CLDND2Q8NHS1 167 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 MAGEE2Q8TD90 523 aaPredicted RBP11.11□□□□□ -0.63
UBR4-213ENST00000483922 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 PMM1Q92871 262 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 DDIT4LQ96D03 193 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 ALKBH3Q96Q83 286 aaPredicted RBP11.11□□□□□ -0.63
UBR4-213ENST00000483922 SLC38A1Q9H2H9 487 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 LPAR2Q9HBW0 351 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 EXD2Q9NVH0 621 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 SPEF1Q9Y4P9 236 aa11.11□□□□□ -0.63
UBR4-213ENST00000483922 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 COPEO14579 308 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 NPHS1O60500 1241 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 SNUPNO95149 360 aaKnown RBP11.1□□□□□ -0.63
UBR4-213ENST00000483922 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
UBR4-213ENST00000483922 HPXP02790 462 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 CHRM4P08173 479 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 CBR1P16152 277 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 NPR2P20594 1047 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 ACAA2P42765 397 aaKnown RBP11.1□□□□□ -0.63
UBR4-213ENST00000483922 HTR3AP46098 478 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 KHKP50053 298 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 LMO4P61968 165 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 ARF1P84077 181 aaKnown RBP11.1□□□□□ -0.63
UBR4-213ENST00000483922 EPS8Q12929 822 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 GPAT4Q86UL3 456 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
UBR4-213ENST00000483922 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 FAM169BQ8N8A8 192 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 OIT3Q8WWZ8 545 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 YIPF5Q969M3 257 aa11.1□□□□□ -0.63
UBR4-213ENST00000483922 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms