RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FAIMQ9NVQ4 179 aa15.76■□□□□ 0.11
ATG4B-221ENST00000483778 PARPBPQ9NWS1 579 aa15.76■□□□□ 0.11
ATG4B-221ENST00000483778 DCTN4Q9UJW0 460 aa15.76■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF443Q9Y2A4 671 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-221ENST00000483778 SLC9A8Q9Y2E8 581 aa15.76■□□□□ 0.11
ATG4B-221ENST00000483778 AQP7P3A6NL99 342 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 TRPC5OSA6NMA1 111 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 IL6P05231 212 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ZCCHC18P0CG32 403 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 MPGP29372 298 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ANXA11P50995 505 aaKnown RBP15.75■□□□□ 0.11
ATG4B-221ENST00000483778 NUDT6P53370 316 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 GSTA3Q16772 222 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 SSX8Q7RTT4 187 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 SERPINA11Q86U17 422 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 FBXL14Q8N1E6 418 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 KDM8Q8N371 416 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF525Q8N782 197 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 GLB1L3Q8NCI6 653 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-221ENST00000483778 TMEM45BQ96B21 275 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 TMEM19Q96HH6 336 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ADAD1Q96M93 576 aaKnown RBP15.75■□□□□ 0.11
ATG4B-221ENST00000483778 RHNO1Q9BSD3 238 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 MANSC1Q9H8J5 431 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 BARX1Q9HBU1 254 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ADPRHL2Q9NX46 363 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 P2RX2Q9UBL9 471 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 MOKQ9UQ07 419 aa15.75■□□□□ 0.11
ATG4B-221ENST00000483778 ATP6V1G2-DDX39BF2Z307 99 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 NPIPB7O75200 414 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 GPIP06744 558 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 IDO1P14902 403 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 SELENOPP49908 381 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 DSTNP60981 165 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 MAGOHP61326 146 aaKnown RBP15.74■□□□□ 0.11
ATG4B-221ENST00000483778 TXNL4AP83876 142 aaKnown RBP15.74■□□□□ 0.11
ATG4B-221ENST00000483778 GNA13Q14344 377 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 WBP2NLQ6ICG8 309 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 CXXC5Q7LFL8 322 aaKnown RBP15.74■□□□□ 0.11
ATG4B-221ENST00000483778 GPAT4Q86UL3 456 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 COMTD1Q86VU5 262 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 EPHX4Q8IUS5 362 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF440Q8IYI8 595 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 MAL2Q969L2 176 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 C3orf49Q96BT1 292 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 PAIP1Q9H074 479 aaKnown RBP15.74■□□□□ 0.11
ATG4B-221ENST00000483778 SDR39U1Q9NRG7 319 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-221ENST00000483778 PCDHB14Q9Y5E9 798 aa15.74■□□□□ 0.11
ATG4B-221ENST00000483778 NR5A2O00482 541 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF500O60304 480 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 LGI1O95970 557 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 TP53P04637 393 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 HOXB9P17482 250 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 POLR2JP52435 117 aaKnown RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 MAP2K6P52564 334 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 LRRC74AQ0VAA2 488 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 RAB35Q15286 201 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 NRF1Q16656 503 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 C1orf140Q5VVS0 124 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 TMEM225Q6GV28 225 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 SLC2A7Q6PXP3 512 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 CREB3L2Q70SY1 520 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 HIPK1Q86Z02 1210 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 C10orf111Q8N326 155 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 C1orf162Q8NEQ5 155 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 GTF2H4Q92759 462 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
ATG4B-221ENST00000483778 PRR14Q9BWN1 585 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 ZIM2Q9NZV7 527 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 SEC14L4Q9UDX3 406 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 AMDHD2Q9Y303 409 aa15.73■□□□□ 0.11
ATG4B-221ENST00000483778 FBN3Q75N90 2809 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 STAB1Q9NY15 2570 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 A8MVM7 634 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TMEM229AB2RXF0 380 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TLX2O43763 284 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-221ENST00000483778 UPK3AO75631 287 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 ANP32DO95626 131 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 PRPS1P60891 318 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TUBA1BP68363 451 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TUBA4AP68366 448 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 EGR4Q05215 589 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 LIN52Q52LA3 116 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 RNF220Q5VTB9 566 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 ATG16L1Q676U5 607 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 HMBOX1Q6NT76 420 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TUBA1AQ71U36 451 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 DEPDC4Q8N2C3 294 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 BCL2L2Q92843 193 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-221ENST00000483778 TLCD1Q96CP7 247 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 ITCHQ96J02 903 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 PTDSS2Q9BVG9 487 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 SPATA9Q9BWV2 254 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 SEC61A2Q9H9S3 476 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 SLAMF8Q9P0V8 285 aa15.72■□□□□ 0.11
ATG4B-221ENST00000483778 IGHV1-18A0A0C4DH31 117 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 A0A0G2JPF8 293 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 ELOA3DA6NLF2 546 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-221ENST00000483778 HNRNPCL2B2RXH8 293 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 HNRNPCL3B7ZW38 293 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms