RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TIMM10BQ9Y5J6 103 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 GMPPBQ9Y5P6 360 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 ALG6Q9Y672 507 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 V9GYY5 206 aaPredicted RBP2.29□□□□□ -2.04
LAPTM4A-202ENST00000483117 UNC13AQ9UPW8 1703 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 BRD4O60885 1362 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TRAV6A0A075B6T7 132 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A0A6YYD4 124 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 IGHV3-38A0A0C4DH36 116 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LRP5LA4QPB2 252 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SRRM4A7MD48 611 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LMO7DNF2Z398 122 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NDUFAB1O14561 156 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TM9SF1O15321 606 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SIGLEC5O15389 551 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAMP3O60896 148 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 HUS1O60921 280 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 UGT2B17O75795 530 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR2J3O76001 311 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SMC2O95347 1197 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 AP2A1O95782 977 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TMEM50AO95807 157 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANGPTL1O95841 491 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 MYL2P10916 166 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 CCL2P13500 99 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NCK1P16333 377 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C4BPBP20851 252 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP5A1P25705 553 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 FOXN2P32314 431 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 RPL9P32969 192 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 CRATP43155 626 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 MAGEA5P43359 124 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NDST2P52849 883 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NDUFV3P56181 108 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 BACE1P56817 501 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LYZP61626 148 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 PSMC5P62195 406 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 KCNJ2P63252 427 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TNNC1P63316 161 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 XIAPP98170 497 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 KLRB1Q12918 225 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C1orf61Q13536 156 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 DGCR6Q14129 220 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 EIF2B1Q14232 305 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 GK3PQ14409 553 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 HSDL1Q3SXM5 330 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C9orf135Q5VTT2 229 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 RNLSQ5VYX0 342 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SPECC1LQ69YQ0 1117 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 PTRHD1Q6GMV3 140 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 FAHD2BQ6P2I3 314 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ULK3Q6PHR2 472 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 BTNL3Q6UXE8 466 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 BAIAP2L2Q6UXY1 529 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF730Q6ZMV8 503 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LRRC74BQ6ZQY2 392 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TPGS1Q6ZTW0 290 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LANCL3Q6ZV70 420 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 Q6ZVQ6 151 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 COPS6Q7L5N1 327 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 HSD11B1LQ7Z5J1 315 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NUDCD3Q8IVD9 361 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC35F2Q8IXU6 374 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 DND1Q8IYX4 353 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C11orf42Q8N5U0 333 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C8orf31Q8N9H6 132 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 RPLP0P6Q8NHW5 317 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 BADQ92934 168 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ART4Q93070 314 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 UBE2E3Q969T4 207 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TADA1Q96BN2 335 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF707Q96C28 371 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ECHDC3Q96DC8 303 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ASB9Q96DX5 294 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 FAHD2AQ96GK7 314 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 C9orf72Q96LT7 481 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLCC1Q96S66 551 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 LLPHQ9BRT6 129 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 APOOQ9BUR5 198 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 TEKT3Q9BXF9 490 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NXF5Q9H1B4 397 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 RHOJQ9H4E5 214 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANKRA2Q9H9E1 313 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPN2Q9H9Y4 310 aaPredicted RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NMUR1Q9HB89 426 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ADAP2Q9NPF8 381 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF302Q9NR11 478 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NANSQ9NR45 359 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 PXMP2Q9NR77 195 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC17A5Q9NRA2 495 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPATCH2LQ9NWQ4 482 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANAPC11Q9NYG5 84 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 NKIRAS1Q9NYS0 192 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 AHSPQ9NZD4 102 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms