RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 PARPBPQ9NWS1 579 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 LAMP3Q9UQV4 416 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
COL16A1-212ENST00000482478 A0A1W2PR80 420 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 OR5H1A6NKK0 313 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SERPINB7O75635 380 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 KRT33AO76009 404 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 RPS5P46782 204 aaKnown RBP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 PTH2RP49190 550 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 RPS4XP62701 263 aaKnown RBP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 H3F3AP84243 136 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SLC17A1Q14916 467 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 ALG10BQ5I7T1 473 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 DHRS4L2Q6PKH6 230 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 KLHL24Q6TFL4 600 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SEZ6L2Q6UXD5 910 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 RANBP3LQ86VV4 465 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF611Q8N823 705 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 C11orf65Q8NCR3 313 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SLC25A36Q96CQ1 311 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 Q96MF0 132 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 ALKBH3Q96Q83 286 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF385DQ9H6B1 395 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 TMEM38AQ9H6F2 299 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 SLC52A3Q9NQ40 469 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 NPAP1Q9NZP6 1156 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 POU2F3Q9UKI9 436 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 FREM1Q5H8C1 2179 aa13.83□□□□□ -0.2
COL16A1-212ENST00000482478 A0A1B0GWA3 101 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 ABCD4O14678 606 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 OPN1SWP03999 348 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 ITGA5P08648 1049 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 PTNP21246 168 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 HTR2AP28223 471 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF83P51522 516 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 SELPLGQ14242 412 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 GLIPR1L2Q4G1C9 344 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 TMEM225Q6GV28 225 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 COMTD1Q86VU5 262 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 P2RY8Q86VZ1 359 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 BHLHE22Q8NFJ8 381 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-212ENST00000482478 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 NEUROG1Q92886 237 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 SLC38A4Q969I6 547 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 GTPBP3Q969Y2 492 aaKnown RBP13.82□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF385AQ96PM9 386 aaKnown RBP13.82□□□□□ -0.2
COL16A1-212ENST00000482478 CGREF1Q99674 301 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 SF3B5Q9BWJ5 86 aaKnown RBP13.82□□□□□ -0.2
COL16A1-212ENST00000482478 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 SLCO5A1Q9H2Y9 848 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 ALG2Q9H553 416 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 DLL4Q9NR61 685 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 FGFR1OP2Q9NVK5 253 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 MTORP42345 2549 aa13.82□□□□□ -0.2
COL16A1-212ENST00000482478 M0R1B8 84 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 PNMTP11086 282 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 GPX2P18283 190 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 CDH2P19022 906 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-212ENST00000482478 ATP5J2P56134 94 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 TGFBR3Q03167 851 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 SPOCK1Q08629 439 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF672Q499Z4 452 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-212ENST00000482478 RUNDC3AQ59EK9 446 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 TSPO2Q5TGU0 170 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 OR7E24Q6IFN5 339 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 NIPAL3Q6P499 406 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 C6orf89Q6UWU4 347 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 TMEM108Q6UXF1 575 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 DLEU7Q6UYE1 221 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 ABHD12BQ7Z5M8 362 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-212ENST00000482478 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 DPP10Q8N608 796 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 SMYD1Q8NB12 490 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 C18orf12Q96KH6 178 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 ANKRD27Q96NW4 1050 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 TRIM2Q9C040 744 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 SLC7A10Q9NS82 523 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 FAIMQ9NVQ4 179 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 PRDM4Q9UKN5 801 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 RASD1Q9Y272 281 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 GMEB1Q9Y692 573 aa13.81□□□□□ -0.2
COL16A1-212ENST00000482478 FLNAP21333 2647 aaKnown RBP13.81□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF587BE7ETH6 402 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 M0R3H8 397 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 NPIPB7O75200 414 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 VAMP5O95183 116 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 VIMP08670 466 aaKnown RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 NTF4P34130 210 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 FOXG1P55316 489 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 MMEL1Q495T6 779 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 SLC22A25Q6T423 547 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 C5orf46Q6UWT4 87 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 C17orf78Q8N4C9 275 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms