RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KIR2DS4P43632 304 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 CRYBB1P53674 252 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 FGL1Q08830 312 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 LRRC23Q53EV4 343 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 OR52E8Q6IFG1 317 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 FAM43BQ6ZT52 329 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 PGAP1Q75T13 922 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 TRIM69Q86WT6 500 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 DCAF4L2Q8NA75 395 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 SUMF2Q8NBJ7 301 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 OR10G3Q8NGC4 313 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 OR51S1Q8NGJ8 323 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 FAM110BQ8TC76 370 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 RNF138Q8WVD3 245 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 MAIP1Q8WWC4 291 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 ELSPBP1Q96BH3 223 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 TIMD4Q96H15 378 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 SLC35E1Q96K37 410 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 RBM14Q96PK6 669 aaKnown RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 GON7Q9BXV9 100 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 RBKSQ9H477 322 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 NXF3Q9H4D5 531 aaKnown RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 POLE4Q9NR33 117 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 EXTL2Q9UBQ6 330 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 PLEKHH1Q9ULM0 1364 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 TCRBV9S1A1TA0A576 114 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 E9PBE3 544 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 HSD17B6O14756 317 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 SURF6O75683 361 aaKnown RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 CCDC130P13994 396 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 CCR1P32246 355 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 OXA1LQ15070 435 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 SLC34A3Q8N130 599 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 EIF1ADQ8N9N8 165 aaKnown RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 OR8J1Q8NGP2 316 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 MAGEE2Q8TD90 523 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 MYDGFQ969H8 173 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 CMTM7Q96FZ5 175 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 NAP1L5Q96NT1 182 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 THUMPD1Q9NXG2 353 aaKnown RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 COPS3Q9UNS2 423 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 ASF1AQ9Y294 204 aa3.79□□□□□ -1.8
SF3B1-210ENST00000482158 RPL36Q9Y3U8 105 aaKnown RBP3.79□□□□□ -1.8
SF3B1-210ENST00000482158 CDC42BPBQ9Y5S2 1711 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 CLRN2A0PK11 232 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 POLR2DO15514 142 aaKnown RBP3.78□□□□□ -1.8
SF3B1-210ENST00000482158 FAM189A1O60320 539 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 UGT1A9O60656 530 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 DBTP11182 482 aaKnown RBP3.78□□□□□ -1.8
SF3B1-210ENST00000482158 ZNF17P17021 662 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 OPRD1P41143 372 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 KPNA2P52292 529 aaKnown RBP3.78□□□□□ -1.8
SF3B1-210ENST00000482158 ATP1B3P54709 279 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 TIMM10P62072 90 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 SELENOTP62341 195 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 TNFRSF17Q02223 184 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 ASPHQ12797 758 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 NSDHLQ15738 373 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 PARP15Q460N3 678 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 TIGD3Q6B0B8 471 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 UQCC3Q6UW78 93 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 CCDC65Q8IXS2 484 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 UFD1Q92890 307 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 CCT7Q99832 543 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 P2RY13Q9BPV8 354 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 RNF167Q9H6Y7 350 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 NHEJ1Q9H9Q4 299 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-210ENST00000482158 MCCC2Q9HCC0 563 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 MMP26Q9NRE1 261 aa3.78□□□□□ -1.8
SF3B1-210ENST00000482158 NSG1A0A0A6YYJ2 146 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 SNTNA6NMZ2 147 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 LOC110117498-PIK3R3F6TDL0 507 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 HIP1O00291 1037 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 RIPK2O43353 540 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 AZU1P20160 251 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 PRPS1P60891 318 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 CDK16Q00536 496 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 MICBQ29980 383 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 PAGE3Q5JUK9 113 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 ZNF530Q6P9A1 599 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-210ENST00000482158 TMIGD1Q6UXZ0 262 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 RNF165Q6ZSG1 346 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 SLC26A11Q86WA9 606 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 RALGPS2Q86X27 583 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-210ENST00000482158 PNKDQ8N490 385 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 LINC01555Q8NAE3 123 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 C10orf35Q96D05 121 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 CYYR1Q96J86 154 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 NPY6RQ99463 290 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 ASB8Q9H765 288 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 MTRF1LQ9UGC7 380 aaKnown RBP3.77□□□□□ -1.81
SF3B1-210ENST00000482158 NEU3Q9UQ49 428 aa3.77□□□□□ -1.81
SF3B1-210ENST00000482158 MED7O43513 233 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 TIMM8AO60220 97 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-210ENST00000482158 FCMRO60667 390 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 OXSR1O95747 527 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-210ENST00000482158 CHTF8P0CG12 524 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 GSSP48637 474 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 DLX1P56177 255 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms