RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SF3B5Q9BWJ5 86 aaKnown RBP12.85□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF416Q9BWM5 594 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF665Q9H7R5 613 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 ZMAT3Q9HA38 289 aaKnown RBP12.85□□□□□ -0.35
HDAC6-224ENST00000481929 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF180Q9UJW8 692 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 SLC35A3Q9Y2D2 325 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 POC1B-GALNT4F8VUJ3 575 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 SLC28A1O00337 649 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 PLPP2O43688 288 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 AK1P00568 194 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 GSNP06396 782 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
HDAC6-224ENST00000481929 NUDT17P0C025 328 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 PRTN3P24158 256 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 PGM1P36871 562 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 HPCAL1P37235 193 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 HTR3AP46098 478 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 SH3BGRP55822 239 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-224ENST00000481929 RPL38P63173 70 aaKnown RBP12.84□□□□□ -0.35
HDAC6-224ENST00000481929 NPRL3Q12980 569 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 DCAF12L2Q5VW00 463 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 GPAT4Q86UL3 456 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 LCA5Q86VQ0 697 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 PSMA8Q8TAA3 256 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 SFXN5Q8TD22 340 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 OR5P2Q8WZ92 322 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 RAB39BQ96DA2 213 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 C1QTNF5Q9BXJ0 243 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 MRPL37Q9BZE1 423 aaKnown RBP12.84□□□□□ -0.35
HDAC6-224ENST00000481929 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 PIF1Q9H611 641 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
HDAC6-224ENST00000481929 TMED7-TICAM2A0A0A6YYA0 188 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 ZNF208O43345 1280 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 FCMRO60667 390 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 UROSP10746 265 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 NEFHP12036 1026 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 ARR3P36575 388 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 SELENOPP49908 381 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
HDAC6-224ENST00000481929 FAM153CQ494X1 144 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 TMEM99Q8N816 258 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 OR5AK3PQ8NH89 298 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 DUX5Q96PT3 197 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 SERHL2Q9H4I8 314 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 ATP6V1HQ9UI12 483 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 TMED7Q9Y3B3 224 aa12.83□□□□□ -0.36
HDAC6-224ENST00000481929 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 DUXAA6NLW8 204 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 SCAMP2O15127 329 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 BCAS1O75363 584 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 AKR7A3O95154 331 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 C6orf47O95873 294 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 FSHBP01225 129 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 GPIP06744 558 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 NR4A1P22736 598 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 GATA3P23771 443 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 RPL3P39023 403 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 ALDH3B1P43353 468 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 IDH2P48735 452 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 POLR2HP52434 150 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 NAA20P61599 178 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 RPS26P62854 115 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 ATP6AP1LQ52LC2 224 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 RFTN2Q52LD8 501 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 LINGO2Q7L985 606 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 OLIG3Q7RTU3 272 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 ARFGAP2Q8N6H7 521 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 OR7A2PQ8NGA2 310 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 OIT3Q8WWZ8 545 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 CCDC126Q96EE4 140 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 PKP2Q99959 881 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 SYT3Q9BQG1 590 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 ZNF350Q9GZX5 532 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 C7orf69Q9H7B7 122 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 TNFRSF12AQ9NP84 129 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 OSGIN1Q9UJX0 560 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 TMED5Q9Y3A6 229 aa12.82□□□□□ -0.36
HDAC6-224ENST00000481929 NUP214P35658 2090 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-224ENST00000481929 AQP7P3A6NL99 342 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 UPK3AO75631 287 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 RP2O75695 350 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 NCR1O76036 304 aa12.81□□□□□ -0.36
HDAC6-224ENST00000481929 LAMP1P11279 417 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms