RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 BCKDHAP12694 445 aa2.53□□□□□ -2
COPA-204ENST00000481522 IL10P22301 178 aa2.53□□□□□ -2
COPA-204ENST00000481522 RPA1P27694 616 aa2.53□□□□□ -2
COPA-204ENST00000481522 CDH5P33151 784 aaPredicted RBP2.53□□□□□ -2
COPA-204ENST00000481522 RPL4P36578 427 aaKnown RBP2.53□□□□□ -2
COPA-204ENST00000481522 OR3A4PP47883 348 aa2.53□□□□□ -2
COPA-204ENST00000481522 HLCSP50747 726 aa2.53□□□□□ -2
COPA-204ENST00000481522 DIO3P55073 304 aa2.53□□□□□ -2
COPA-204ENST00000481522 OSTNP61366 133 aa2.53□□□□□ -2
COPA-204ENST00000481522 RPS8P62241 208 aaKnown RBP2.53□□□□□ -2
COPA-204ENST00000481522 KCNJ11Q14654 390 aa2.53□□□□□ -2
COPA-204ENST00000481522 PRR4Q16378 134 aa2.53□□□□□ -2
COPA-204ENST00000481522 C2orf83Q53S99 150 aa2.53□□□□□ -2
COPA-204ENST00000481522 LDLRAP1Q5SW96 308 aa2.53□□□□□ -2
COPA-204ENST00000481522 ZNF544Q6NX49 715 aa2.53□□□□□ -2
COPA-204ENST00000481522 IRGCQ6NXR0 463 aa2.53□□□□□ -2
COPA-204ENST00000481522 Q6ZVH6 145 aa2.53□□□□□ -2
COPA-204ENST00000481522 LRRC70Q7Z2Q7 622 aa2.53□□□□□ -2
COPA-204ENST00000481522 BPIFB2Q8N4F0 458 aa2.53□□□□□ -2
COPA-204ENST00000481522 HDDC3Q8N4P3 179 aa2.53□□□□□ -2
COPA-204ENST00000481522 MRPL43Q8N983 215 aaKnown RBP2.53□□□□□ -2
COPA-204ENST00000481522 SETD7Q8WTS6 366 aaKnown RBP2.53□□□□□ -2
COPA-204ENST00000481522 SLC25A38Q96DW6 304 aa2.53□□□□□ -2
COPA-204ENST00000481522 NUS1Q96E22 293 aa2.53□□□□□ -2
COPA-204ENST00000481522 DHTKD1Q96HY7 919 aaPredicted RBP2.53□□□□□ -2
COPA-204ENST00000481522 SAMD8Q96LT4 415 aa2.53□□□□□ -2
COPA-204ENST00000481522 NMUR2Q9GZQ4 415 aa2.53□□□□□ -2
COPA-204ENST00000481522 RAB17Q9H0T7 212 aa2.53□□□□□ -2
COPA-204ENST00000481522 Q9H3A6 140 aa2.53□□□□□ -2
COPA-204ENST00000481522 EHD1Q9H4M9 534 aa2.53□□□□□ -2
COPA-204ENST00000481522 FN3KRPQ9HA64 309 aa2.53□□□□□ -2
COPA-204ENST00000481522 PKHD1P08F94 4074 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 RAI1Q7Z5J4 1906 aaPredicted RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 SYNRGQ9UMZ2 1314 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 FAM230AA0A1W2PPH8 454 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 DHRS7CA6NNS2 312 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 WASH3PC4AMC7 463 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 CXCL11O14625 94 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 SEC22BO75396 215 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 BBOX1O75936 387 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 IGHV3-23P01764 117 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 ASGR1P07306 291 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 UQCRBP14927 111 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 CCNA2P20248 432 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 ASMTP46597 345 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 RPS9P46781 194 aaKnown RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 GNPDA1P46926 289 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 ATXN3P54252 364 aaPredicted RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 RND3P61587 244 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 OC90Q02509 493 aaPredicted RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 EXOSC2Q13868 293 aaKnown RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 CAPRIN1Q14444 709 aaKnown RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 CDKN3Q16667 212 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 KYAT1Q16773 422 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 OR5M10Q6IEU7 315 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 SCYL2Q6P3W7 929 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 WASH2PQ6VEQ5 465 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 STAC2Q6ZMT1 411 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 RBM43Q6ZSC3 357 aaKnown RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 EFCAB13Q8IY85 973 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 CERS5Q8N5B7 392 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 ZSCAN4Q8NAM6 433 aaPredicted RBP2.52□□□□□ -2.01
COPA-204ENST00000481522 STKLD1Q8NE28 680 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 GIPC3Q8TF64 312 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 PSMG2Q969U7 264 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 MCHR2Q969V1 340 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 UPRTQ96BW1 309 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 C16orf74Q96GX8 76 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 FAM111AQ96PZ2 611 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 FEM1AQ9BSK4 669 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 COMMD4Q9H0A8 199 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 LPAR2Q9HBW0 351 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 YAE1D1Q9NRH1 226 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 PLSCR3Q9NRY6 295 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 ATP6V1HQ9UI12 483 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 L3MBTL1Q9Y468 752 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 GMPPBQ9Y5P6 360 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 F5P12259 2224 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 NUP98P52948 1817 aa2.52□□□□□ -2.01
COPA-204ENST00000481522 SAGE2PA6NJ88 616 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ZSCAN5BA6NJL1 495 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 LRRC30A6NM36 301 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 TMEM110-MUSTN1A8MSY1 372 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ZNF254O75437 659 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 TOM1L1O75674 476 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 CABYRO75952 493 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ACTL6AO96019 429 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 STSP08842 583 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 IQCF3P0C7M6 154 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ANXA3P12429 323 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 DHPSP49366 369 aaPredicted RBP2.51□□□□□ -2.01
COPA-204ENST00000481522 RPL8P62917 257 aaKnown RBP2.51□□□□□ -2.01
COPA-204ENST00000481522 BCL2L1Q07817 233 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ZNF154Q13106 437 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 SLC39A6Q13433 755 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 RAET1GQ6H3X3 334 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 TMEM184AQ6ZMB5 413 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 SCARA5Q6ZMJ2 495 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 HSD11B1LQ7Z5J1 315 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 TMEM110Q86TL2 294 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms