RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 P4HA3Q7Z4N8 544 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 TSEN54Q7Z6J9 526 aaKnown RBP8.1□□□□□ -1.11
VCP-206ENST00000480327 CDC20BQ86Y33 519 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 DNAJA4Q8WW22 397 aaPredicted RBP8.1□□□□□ -1.11
VCP-206ENST00000480327 ROBO4Q8WZ75 1007 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 DDIT4LQ96D03 193 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 SLC47A1Q96FL8 570 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 SRXN1Q9BYN0 137 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 PRRG4Q9BZD6 226 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 MUC13Q9H3R2 512 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 SLC7A8Q9UHI5 535 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 RIMS3Q9UJD0 308 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 POMPQ9Y244 141 aa8.1□□□□□ -1.11
VCP-206ENST00000480327 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 SLC22A20A6NK97 555 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 A8MVM7 634 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SULT2B1O00204 365 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 KPNA4O00629 521 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 FFAR1O14842 300 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ADAMDEC1O15204 470 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ZNF208O43345 1280 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 FMO6PO60774 539 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 LYPD3O95274 346 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SYNGR4O95473 234 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 TGM6O95932 706 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 PNMTP11086 282 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 IMPDH2P12268 514 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 CBLP22681 906 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 CEACAM8P31997 349 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 RPS5P46782 204 aaKnown RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 DIO1P49895 249 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 OR2B6P58173 313 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ADAM8P78325 824 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 VLDLRP98155 873 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 TRAP1Q12931 704 aaKnown RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 PON3Q15166 354 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SLC25A35Q3KQZ1 300 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ZNF613Q6PF04 617 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ESPNLQ6ZVH7 1005 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ASRGL1Q7L266 308 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SPATA24Q86W54 205 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 NKAIN4Q8IVV8 208 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 C9orf106Q8NAJ2 232 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 ZPLD1Q8TCW7 415 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 SLC38A4Q969I6 547 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SLC25A36Q96CQ1 311 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 KTI12Q96EK9 354 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 ADGRG7Q96K78 797 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 PRRC1Q96M27 445 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 SMR3AQ99954 134 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 FNDC11Q9BVV2 318 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 CLEC4MQ9H2X3 399 aaPredicted RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 A4GNTQ9UNA3 340 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 AURKCQ9UQB9 309 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 FAM32AQ9Y421 112 aaKnown RBP8.09□□□□□ -1.11
VCP-206ENST00000480327 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
VCP-206ENST00000480327 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 A0A087WUJ7 227 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 A0A1W2PPR1 153 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 A6NNC1 897 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 CHP2O43745 196 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 AQP8O94778 261 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 OR5F1O95221 314 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ATE1O95260 518 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 AHSA1O95433 338 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 SEMG1P04279 462 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 FABP3P05413 133 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 FPR1P21462 350 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ENPP1P22413 925 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 IFNA8P32881 189 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 IDUAP35475 653 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 EGR4Q05215 589 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 SF3B4Q15427 424 aaKnown RBP eCLIP8.08□□□□□ -1.128e-7■■■□□ 18.1
VCP-206ENST00000480327 OR7A5Q15622 319 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ZNF239Q16600 458 aaKnown RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 FBXL19-AS1Q494R0 122 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 C1orf146Q5VVC0 180 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 C1orf140Q5VVS0 124 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 NSUN5P2Q63ZY6 315 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 TTC33Q6PID6 262 aaPredicted RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 PAMR1Q6UXH9 720 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 TMPPEQ6ZT21 453 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 CYP4Z1Q86W10 505 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ZDHHC21Q8IVQ6 265 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 GCNT2Q8N0V5 402 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 C10orf53Q8N6V4 93 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 WFDC11Q8NEX6 87 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 TMEM255BQ8WV15 326 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 INTS12Q96CB8 462 aaKnown RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms