RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 MAKP20794 623 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 RPS23P62266 143 aaKnown RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 H3F3AP84243 136 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 BST1Q10588 318 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 HNRNPA0Q13151 305 aaKnown RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 FXNQ16595 210 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 KLHL26Q53HC5 615 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 GKAP1Q5VSY0 366 aaPredicted RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 TTC27Q6P3X3 843 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 PGBD2Q6P3X8 592 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 TBC1D15Q8TC07 691 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 CCL17Q92583 94 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 TSPAN17Q96FV3 270 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 C16orf58Q96GQ5 468 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 TSPAN32Q96QS1 320 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 OR11A1Q9GZK7 315 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 GLIPR2Q9H4G4 154 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 NOL11Q9H8H0 719 aaKnown RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 NKIRAS2Q9NYR9 191 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 TAAR3PQ9P1P4 343 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 RPUSD1Q9UJJ7 312 aaKnown RBP9.97□□□□□ -0.81
USP11-208ENST00000480104 CHMP2BQ9UQN3 213 aa9.97□□□□□ -0.81
USP11-208ENST00000480104 H3BNH8 94 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 PCDH7O60245 1069 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 MGRN1O60291 552 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 FGGP02679 453 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.82
USP11-208ENST00000480104 SLC6A9P48067 706 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 SESN3P58005 492 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 MGAT5Q09328 741 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DLG1Q12959 904 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 CBFBQ13951 182 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 HEPACAMQ14CZ8 416 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DUSP5Q16690 384 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 PFKFB4Q16877 469 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 STEAP4Q687X5 459 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DHRS7BQ6IAN0 325 aaPredicted RBP9.96□□□□□ -0.82
USP11-208ENST00000480104 LRIG3Q6UXM1 1119 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 PPIL6Q8IXY8 311 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 CDRT4Q8N9R6 151 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 ADAMTS15Q8TE58 950 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 CFHR4Q92496 578 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 AMDHD1Q96NU7 426 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DIRC2Q96SL1 478 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 LAT2Q9GZY6 243 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 MMP28Q9H239 520 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DECR2Q9NUI1 292 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 FOXJ3Q9UPW0 622 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 HDGFL3Q9Y3E1 203 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
USP11-208ENST00000480104 ABCA13Q86UQ4 5058 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 GNG14A0A1W2PPG7 69 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 PIAS1O75925 651 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 TSPAN9O75954 239 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 RSL1D1O76021 490 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 IPO7O95373 1038 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 CLPTM1O96005 669 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 PDYNP01213 254 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 F13BP05160 661 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 PRPS2P11908 318 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 LYL1P12980 280 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ZNF35P13682 527 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 GFAPP14136 432 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 STMN1P16949 149 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 NTSP30990 170 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 MSX2P35548 267 aaPredicted RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 RAE1P78406 368 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 ARF1P84077 181 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 TRAF3Q13114 568 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 LARS2Q15031 903 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 TSTQ16762 297 aaKnown RBP9.95□□□□□ -0.82
USP11-208ENST00000480104 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 GDPGP1Q6ZNW5 385 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 RAPH1Q70E73 1250 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 POU5F2Q8N7G0 328 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ZNF614Q8N883 585 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 COX18Q8N8Q8 333 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 OR9K2Q8NGE7 335 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 C16orf78Q8WTQ4 265 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 SNX33Q8WV41 574 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ST8SIA1Q92185 356 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ATP6V1E2Q96A05 226 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ELMOD3Q96FG2 381 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 SHCBP1LQ9BZQ2 653 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 NMUR2Q9GZQ4 415 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 EGFL7Q9UHF1 273 aa9.95□□□□□ -0.82
USP11-208ENST00000480104 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 CBFA2T2O43439 604 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 UPK3AO75631 287 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 TGDSO95455 350 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 IGHV2-70P01814 119 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 DDCP20711 480 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 ELK3P41970 407 aa9.94□□□□□ -0.82
USP11-208ENST00000480104 CAPZA2P47755 286 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms