RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TNIP2Q8NFZ5 429 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 OR52E4Q8NGH9 312 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 OR5D16Q8NGK9 328 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 OR5M9Q8NGP3 310 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 OR10D3Q8NH80 312 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 OR5AK3PQ8NH89 298 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 RP9Q8TA86 221 aaKnown RBP4.37□□□□□ -1.71
PTCD3-213ENST00000480102 POC1BQ8TC44 478 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 DOK4Q8TEW6 326 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 DNAJA4Q8WW22 397 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-213ENST00000480102 FIG4Q92562 907 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 VPS33AQ96AX1 596 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 STARD4Q96DR4 205 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 CHMP6Q96FZ7 201 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF607Q96SK3 696 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 CGREF1Q99674 301 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 HOPXQ9BPY8 73 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-213ENST00000480102 EBF4Q9BQW3 602 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SLC39A3Q9BRY0 314 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 INPP5KQ9BT40 448 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SLC19A3Q9BZV2 496 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 CACYBPQ9HB71 228 aaKnown RBP4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SAR1AQ9NR31 198 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SLC25A37Q9NYZ2 338 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 FLRT3Q9NZU0 649 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 KLHL13Q9P2N7 655 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 CHRNA9Q9UGM1 479 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 MKLN1Q9UL63 735 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 GPR52Q9Y2T5 361 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SLC6A5Q9Y345 797 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 SCN2AQ99250 2005 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 NAV2Q8IVL1 2488 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 CSMD1Q96PZ7 3565 aa4.37□□□□□ -1.71
PTCD3-213ENST00000480102 UQCRHLA0A096LP55 91 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 A0A0G2JND7 137 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 A0A0J9YW62 118 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PYCARD-AS1I3L0S3 204 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SEC14L5O43304 696 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SCO2O43819 266 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 OR2T1O43869 369 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 NME6O75414 186 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PRKD3O94806 890 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CPSF4O95639 269 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TGM6O95932 706 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 IFNA14P01570 189 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 YES1P07947 543 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CHRM4P08173 479 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 HOXB6P17509 224 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SLC6A2P23975 617 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PRDX6P30041 224 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 LSP1P33241 339 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PCGF2P35227 344 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CD79BP40259 229 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ACAA2P42765 397 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CRATP43155 626 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ARFIP2P53365 341 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SUCLG1P53597 346 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CLDN20P56880 219 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CARD18P57730 90 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CDK6Q00534 326 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PON3Q15166 354 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SYPL1Q16563 259 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 GPAT3Q53EU6 434 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SYT14P1Q58G82 188 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PAGE3Q5JUK9 113 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 C6orf10Q5SRN2 563 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 GCNT6Q5T4J0 391 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CCNJQ5T5M9 372 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 HBMQ6B0K9 141 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 C8orf82Q6P1X6 216 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF613Q6PF04 617 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PAQR6Q6TCH4 344 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 Q6ZT83 130 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PLEKHM3Q6ZWE6 761 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 WDR53Q7Z5U6 358 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PATL1Q86TB9 770 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CALHM3Q86XJ0 350 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ADGRG3Q86Y34 549 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 LIX1LQ8IVB5 337 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ZZZ3Q8IYH5 903 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 RPRMLQ8N4K4 120 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ANKFN1Q8N957 763 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SCAIQ8N9R8 606 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 RELL2Q8NC24 303 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 FAM156AQ8NDB6 213 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 OR9I1Q8NGQ6 314 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 OR52P1PQ8NH57 321 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 FNDC9Q8TBE3 224 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PIGXQ8TBF5 258 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 WDR60Q8WVS4 1066 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 OSTF1Q92882 214 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM45BQ96B21 275 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 DDIT4LQ96D03 193 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ZHX1-C8orf76Q96EF9 292 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM19Q96HH6 336 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 REXO5Q96IC2 774 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms