RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	GAS1	P54826	345 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	DSCR4	P56555	118 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	PCBP3	P57721	371 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	DSCR9	P59020	149 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	CBFB	Q13951	182 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	ELOA3B	Q3SY89	546 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	DHRS4L2	Q6PKH6	230 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	RINL	Q6ZS11	566 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZAR1	Q86SH2	424 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	ELOA3	Q8NG57	546 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	TMEM234	Q8WY98	164 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	PINK1	Q9BXM7	581 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	TRIM15	Q9C019	465 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	ADAM19	Q9H013	955 aa		13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-238	ENST00000479894	CXCR6	O00574	342 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	NDUFS7	O75251	213 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	PGC	P20142	388 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	CFP	P27918	469 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	P2RX1	P51575	399 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	COPZ1	P61923	177 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	MAPK11	Q15759	364 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	EXOC3L2	Q2M3D2	409 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	MTX3	Q5HYI7	312 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	OR6K3	Q8NGY3	331 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	OR5W2	Q8NH69	310 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	PROX1	Q92786	737 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAM162A	Q96A26	154 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	ACTR6	Q9GZN1	396 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	GORASP2	Q9H8Y8	452 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	CD300A	Q9UGN4	299 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	GDF2	Q9UK05	429 aa	Predicted RBP	13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	DKKL1	Q9UK85	242 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	SLC9A8	Q9Y2E8	581 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	GPR52	Q9Y2T5	361 aa		13.82	□□□□□ -0.2
HDLBP-238	ENST00000479894	CDHR4	A6H8M9	788 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	SSX4	O60224	188 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZIC3	O60481	467 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	MFN2	O95140	757 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	NUDT14	O95848	222 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	FCGR2A	P12318	317 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	SLC25A16	P16260	332 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	IL11	P20809	199 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	FKBP2	P26885	142 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	AQP1	P29972	269 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	IFNA8	P32881	189 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	PGM1	P36871	562 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	B3GALT5-AS1	P59052	145 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	TRIM25	Q14258	630 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	PGGHG	Q32M88	737 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF672	Q499Z4	452 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	NCMAP	Q5T1S8	102 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	C12orf54	Q6X4T0	127 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	DTX2	Q86UW9	622 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	C10orf111	Q8N326	155 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	TMCO5A	Q8N6Q1	288 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	FADS6	Q8N9I5	356 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	OR52E4	Q8NGH9	312 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZBTB8A	Q96BR9	441 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZMYND19	Q96E35	227 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	TACO1	Q9BSH4	297 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	THTPA	Q9BU02	230 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	LRMDA	Q9H2I8	198 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	DSN1	Q9H410	356 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	FBXL2	Q9UKC9	423 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	SAMD4A	Q9UPU9	718 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	SNX13	Q9Y5W8	968 aa		13.81	□□□□□ -0.2
HDLBP-238	ENST00000479894	NPIPA5	A0A0B4J1W7	369 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CFAP73	A6NFT4	308 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	NPIPA7	E9PJI5	369 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAAH	O00519	579 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CYP7B1	O75881	506 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CD3E	P07766	207 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	LINGO3	P0C6S8	592 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	UBTFL6	P0CB48	400 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	NPIPA8	P0DM63	369 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	GGT1	P19440	569 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	PSMB1	P20618	241 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	DPP4	P27487	766 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	HTR3A	P46098	478 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CLDN15	P56746	228 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	NCALD	P61601	193 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAP	Q12884	760 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	TRAP1	Q12931	704 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	MAPK14	Q16539	360 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FXN	Q16595	210 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	MRPL2	Q5T653	305 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	GLYAT	Q6IB77	296 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	DESI1	Q6ICB0	168 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CLEC2A	Q6UVW9	174 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	APOOL	Q6UXV4	268 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	BEND4	Q6ZU67	534 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	UBQLNL	Q8IYU4	475 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	RFLNB	Q8N5W9	214 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	ARIH2OS	Q8N7S6	290 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAM71C	Q8NEG0	241 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	OR2M3	Q8NG83	312 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms