RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GPAT4Q86UL3 456 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 EGFL6Q8IUX8 553 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 SLC43A2Q8N370 569 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 C10orf53Q8N6V4 93 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 KTI12Q96EK9 354 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 SLC47A1Q96FL8 570 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF300Q96RE9 604 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 PSD2Q9BQI7 771 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 PIGMQ9H3S5 423 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 EVA1AQ9H8M9 152 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GALNT8Q9NY28 637 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 PRR14LQ5THK1 2151 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 IGKV1D-42A0A075B6H8 117 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 TRAPPC13A5PLN9 417 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 ARPC2O15144 300 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 CHP2O43745 196 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 CYTIPO60759 359 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 PDE5AO76074 875 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 IFNW1P05000 195 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 T-ENOLP0DO92 83 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 HSD17B1P14061 328 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 YAP1P46937 504 aaKnown RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 SELENOWP63302 87 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 IL1RL1Q01638 556 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 EGR4Q05215 589 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 OTUD3Q5T2D3 398 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 SWT1Q5T5J6 900 aaKnown RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 GLYATQ6IB77 296 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF613Q6PF04 617 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 C6orf89Q6UWU4 347 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 WDR88Q6ZMY6 472 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM99Q8N816 258 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 OR6K3Q8NGY3 331 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 PIGXQ8TBF5 258 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 GEMIN6Q8WXD5 167 aaKnown RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 RNASE6Q93091 150 aaKnown RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 SLC38A4Q969I6 547 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 MARVELD3Q96A59 401 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 SLC41A3Q96GZ6 507 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 NAA11Q9BSU3 229 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 POTEKPQ9BYX7 375 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 C12orf10Q9HB07 376 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 GLRX2Q9NS18 164 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 EMC3Q9P0I2 261 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 SEC14L4Q9UDX3 406 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 FBXO9Q9UK97 447 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-215ENST00000478531 TRAPPC4Q9Y296 219 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
BRCA1-215ENST00000478531 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 TRAV36DV7A0A075B6V5 113 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 A0A087WUJ7 227 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 MSTNO14793 375 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 DNPH1O43598 174 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 EIF1BO60739 113 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 NPIPB7O75200 414 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 THY1P04216 161 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 YES1P07947 543 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 PIN1Q13526 163 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 IFI44LQ53G44 452 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 EEF1A1P5Q5VTE0 462 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 PAQR6Q6TCH4 344 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CBLL1Q75N03 491 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 NUFIP2Q7Z417 695 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 GDF7Q7Z4P5 450 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 STK32CQ86UX6 486 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 FAM86B1Q8N7N1 296 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF610Q8N9Z0 462 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 TAAR8Q969N4 342 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CCDC124Q96CT7 223 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 EPYCQ99645 322 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 PTDSS2Q9BVG9 487 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 JKAMPQ9P055 326 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 RHCGQ9UBD6 479 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CD300AQ9UGN4 299 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 MAGEL2Q9UJ55 1249 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 RPS6KA6Q9UK32 745 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ING1Q9UK53 422 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 PRDM4Q9UKN5 801 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 SNX13Q9Y5W8 968 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CCDC168Q8NDH2 2452 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ALPK2Q86TB3 2170 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CELSR1Q9NYQ6 3014 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 AQP7P3A6NL99 342 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF716A6NP11 495 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 A8MXE2 369 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 LRRN3E7EW58 273 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 J3KTA2 159 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 M0R082 166 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 HNRNPRO43390 633 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CGAP01215 116 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 IGHV3-9P01782 118 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CD8BP10966 210 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 POU2F1P14859 743 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 NQO1P15559 274 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms