RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ASB6Q9NWX5 421 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 RNF115Q9Y4L5 304 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 CADP27708 2225 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 PRORSD1PA6NEY8 169 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 DPRXA6NFQ7 191 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 ARHGEF9O43307 516 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 SLC6A2P23975 617 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 ADSLP30566 484 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-215ENST00000478473 BNIP2Q12982 314 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 PPA1Q15181 289 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 OR7A5Q15622 319 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 C5orf46Q6UWT4 87 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 NET1Q7Z628 596 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-215ENST00000478473 DHDDSQ86SQ9 333 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 PTOV1Q86YD1 416 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 HIPK4Q8NE63 616 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 OR9K2Q8NGE7 335 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 THOC1Q96FV9 657 aaKnown RBP20.64■□□□□ 0.89
C9orf3-215ENST00000478473 PTDSS2Q9BVG9 487 aa20.64■□□□□ 0.89
C9orf3-215ENST00000478473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-215ENST00000478473 NF1P21359 2839 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 A0A0G2JND7 137 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 TPST1O60507 370 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 AKR7A3O95154 331 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 ITGA5P08648 1049 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 FAM91A1Q658Y4 838 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 OR7E24Q6IFN5 339 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 LSRQ86X29 649 aaPredicted RBP20.63■□□□□ 0.89
C9orf3-215ENST00000478473 C1orf162Q8NEQ5 155 aaPredicted RBP20.63■□□□□ 0.89
C9orf3-215ENST00000478473 DNAJA4Q8WW22 397 aaPredicted RBP20.63■□□□□ 0.89
C9orf3-215ENST00000478473 MUCL1Q96DR8 90 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 ZNF607Q96SK3 696 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 TAPBPLQ9BX59 468 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 TRIM2Q9C040 744 aa20.63■□□□□ 0.89
C9orf3-215ENST00000478473 ANGPT2O15123 496 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 SERPINB7O75635 380 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 MFN2O95140 757 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 IGHV3-9P01782 118 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 CD3EP07766 207 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 HTR2AP28223 471 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 HOXC5Q00444 222 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 GABRA6Q16445 453 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 GLIPR1L2Q4G1C9 344 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 CASP12Q6UXS9 341 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 C11orf65Q8NCR3 313 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 AKAP1Q92667 903 aaKnown RBP eCLIP20.62■□□□□ 0.89
C9orf3-215ENST00000478473 KAT8Q9H7Z6 458 aaKnown RBP20.62■□□□□ 0.89
C9orf3-215ENST00000478473 SLC7A10Q9NS82 523 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 TESQ9UGI8 421 aaKnown RBP20.62■□□□□ 0.89
C9orf3-215ENST00000478473 RASD1Q9Y272 281 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 SLC25A15Q9Y619 301 aa20.62■□□□□ 0.89
C9orf3-215ENST00000478473 A0A1B0GWA3 101 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 AHSA1O95433 338 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 DANCRP0C864 163 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 PNMTP11086 282 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 FOXG1P55316 489 aaPredicted RBP20.61■□□□□ 0.89
C9orf3-215ENST00000478473 BSPH1Q075Z2 132 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 TSPO2Q5TGU0 170 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 UBE2J2Q8N2K1 259 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 C17orf78Q8N4C9 275 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 POMGNT2Q8NAT1 580 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 OR6S1Q8NH40 331 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 SLC38A4Q969I6 547 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 ZNF385AQ96PM9 386 aaKnown RBP20.61■□□□□ 0.89
C9orf3-215ENST00000478473 NPAP1Q9NZP6 1156 aa20.61■□□□□ 0.89
C9orf3-215ENST00000478473 ZFHX3Q15911 3703 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 LOC102725191A0A1B0GVB3 256 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 C8BP07358 591 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 FAPQ12884 760 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 CAPRIN1Q14444 709 aaKnown RBP20.6■□□□□ 0.89
C9orf3-215ENST00000478473 STK11Q15831 433 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 ZNF672Q499Z4 452 aaPredicted RBP20.6■□□□□ 0.89
C9orf3-215ENST00000478473 COQ5Q5HYK3 327 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 Q5PR19 223 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 TMEM225Q6GV28 225 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 ULK3Q6PHR2 472 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 CREB3L2Q70SY1 520 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 OR52E4Q8NGH9 312 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 TMEM171Q8WVE6 324 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 TMEM120AQ9BXJ8 343 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 GRIP2Q9C0E4 1043 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 CCDC134Q9H6E4 229 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 ADPRHL2Q9NX46 363 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 ANGPT4Q9Y264 503 aa20.6■□□□□ 0.89
C9orf3-215ENST00000478473 IGKV1D-42A0A075B6H8 117 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 ELOA3DA6NLF2 546 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-215ENST00000478473 OVOL3O00110 214 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 FBP2O00757 339 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 OR2T1O43869 369 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 TPST2O60704 377 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 RAD51DO75771 328 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 MPGP29372 298 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 GZMMP51124 257 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 DMTNQ08495 405 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 SELPLGQ14242 412 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 ELOA3BQ3SY89 546 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 SWT1Q5T5J6 900 aaKnown RBP20.59■□□□□ 0.89
C9orf3-215ENST00000478473 ARMC8Q8IUR7 673 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 P3H2Q8IVL5 708 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 SLC30A8Q8IWU4 369 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms