RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CDH24Q86UP0 819 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 RANBP3LQ86VV4 465 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-206ENST00000478214 CDC20BQ86Y33 519 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 P3H2Q8IVL5 708 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 SLC15A3Q8IY34 581 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 ZNF100Q8IYN0 542 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 VANGL1Q8TAA9 524 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-206ENST00000478214 RNF217Q8TC41 542 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 KTI12Q96EK9 354 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-206ENST00000478214 SLC47A1Q96FL8 570 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 MCHR1Q99705 422 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 ACTR6Q9GZN1 396 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 EFCAB1Q9HAE3 211 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 ZNF226Q9NYT6 803 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 NOSIPQ9Y314 301 aaKnown RBP13.81□□□□□ -0.2
HMGA1-206ENST00000478214 HRNRQ86YZ3 2850 aaPredicted RBP13.81□□□□□ -0.2
HMGA1-206ENST00000478214 FREM1Q5H8C1 2179 aa13.81□□□□□ -0.2
HMGA1-206ENST00000478214 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 AQP7P3A6NL99 342 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 SIAH2O43255 324 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 FMO6PO60774 539 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 THBDP07204 575 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 PTNP21246 168 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 CRYGSP22914 178 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 RPS5P46782 204 aaKnown RBP13.8□□□□□ -0.2
HMGA1-206ENST00000478214 P2RY4P51582 365 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 SLC7A2P52569 658 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 CDH12P55289 794 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 FAM91A1Q658Y4 838 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 Q6ZT83 130 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 ARPINQ7Z6K5 226 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 PIGWQ7Z7B1 504 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 OR2T12Q8NG77 320 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 MFSD8Q8NHS3 518 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 SLC38A4Q969I6 547 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 TAAR8Q969N4 342 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 SLC25A36Q96CQ1 311 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 SELENONQ9NZV5 590 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 C6orf203Q9P0P8 240 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-206ENST00000478214 FLVCR1Q9Y5Y0 555 aa13.8□□□□□ -0.2
HMGA1-206ENST00000478214 A0A087WUJ7 227 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 A0A1W2PPR1 153 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 ELOVL7A1L3X0 281 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 CPSF4LA6NMK7 179 aaKnown RBP13.79□□□□□ -0.2
HMGA1-206ENST00000478214 DEFB108AA8MXU0 73 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 GOSR1O95249 250 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 IGHV3-9P01782 118 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 PPP3CBP16298 524 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 IL32P24001 234 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 NUDT2P50583 147 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 LIPEQ05469 1076 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 P2RY6Q15077 328 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 SFRP5Q5T4F7 317 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 C8orf82Q6P1X6 216 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-206ENST00000478214 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 TSPYL5Q86VY4 417 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-206ENST00000478214 MICU2Q8IYU8 434 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 STEAP2Q8NFT2 490 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 OR9K2Q8NGE7 335 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 RASSF5Q8WWW0 418 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 APH1AQ96BI3 265 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 S100PBPQ96BU1 408 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 CMTM5Q96DZ9 223 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 HOPXQ9BPY8 73 aaPredicted RBP13.79□□□□□ -0.2
HMGA1-206ENST00000478214 LIME1Q9H400 295 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 AP3M1Q9Y2T2 418 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 OTOGQ6ZRI0 2925 aa13.79□□□□□ -0.2
HMGA1-206ENST00000478214 ANKRD17O75179 2603 aaKnown RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 TRAV36DV7A0A075B6V5 113 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 NME4O00746 187 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 MRPL33O75394 65 aaKnown RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 LYZL6O75951 148 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 THY1P04216 161 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 TNFRSF1BP20333 461 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 PRDX6P30041 224 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 KDELR2P33947 212 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ITGADQ13349 1161 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 LRRC23Q53EV4 343 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ENTPD8Q5MY95 495 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 FAM69AQ5T7M9 428 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 TMEM225Q6GV28 225 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 C5orf46Q6UWT4 87 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 HACD2Q6Y1H2 254 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 UBE2J2Q8N2K1 259 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 PROX1Q92786 737 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 KISS1RQ969F8 398 aaPredicted RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ZNF385AQ96PM9 386 aaKnown RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
HMGA1-206ENST00000478214 HDHD5Q9BXW7 423 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 OR10A4Q9H209 315 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 BAG5Q9UL15 447 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 SLC9A8Q9Y2E8 581 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
HMGA1-206ENST00000478214 SH3GLB1Q9Y371 365 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms