RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 GLCEO94923 617 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 FAM157BP0CG42 384 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SPI1P17947 270 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 OR12D2P58182 307 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 E2F1Q01094 437 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 NHLH1Q02575 133 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 INSL4Q14641 139 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SF3A2Q15428 464 aaKnown RBP11.15□□□□□ -0.62
PTPRF-212ENST00000477970 CD226Q15762 336 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 ELOA3BQ3SY89 546 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 FCRLBQ6BAA4 426 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 WDR74Q6RFH5 385 aaPredicted RBP11.15□□□□□ -0.62
PTPRF-212ENST00000477970 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 Q8N402 240 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 CYB561A3Q8NBI2 242 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SDR9C7Q8NEX9 313 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 ELOA3Q8NG57 546 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 OR6F1Q8NGZ6 308 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 TP53INP1Q96A56 240 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 NEDD4LQ96PU5 975 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 HMX3A6NHT5 357 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 J3QLW9 94 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 EIF4E2O60573 245 aaKnown RBP11.15□□□□□ -0.62
PTPRF-212ENST00000477970 TRIM3O75382 744 aaPredicted RBP11.15□□□□□ -0.62
PTPRF-212ENST00000477970 MRPL3P09001 348 aaKnown RBP11.15□□□□□ -0.62
PTPRF-212ENST00000477970 GLB1P16278 677 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 ZNF19P17023 458 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 NPR2P20594 1047 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 GRK6P43250 576 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 NDUFAF6Q330K2 333 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 MZT2BQ6NZ67 158 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SFXN4Q6P4A7 337 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 ARL9Q6T311 187 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SPATC1Q76KD6 591 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SSX6Q7RTT6 188 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 SCAIQ8N9R8 606 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 ZBTB44Q8NCP5 570 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 OR5J2Q8NH18 312 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 OR4K13Q8NH42 304 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 MNTQ99583 582 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 MMP25Q9NPA2 562 aa11.15□□□□□ -0.62
PTPRF-212ENST00000477970 K7ESF4 209 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 TOX3O15405 576 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 NCR1O76036 304 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 UCHL1P09936 223 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SLC16A1P53985 500 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ZNF684Q5T5D7 378 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 TRIQKQ629K1 86 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ZNF441Q8N8Z8 693 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 PELI1Q96FA3 418 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 B4DXG7 233 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 TSPAN2O60636 221 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 CD14P08571 375 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 HLA-DMAP28067 261 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 LINC01590Q5TEZ4 76 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 CEACAM19Q7Z692 300 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 WDR5BQ86VZ2 330 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 LRRC17Q8N6Y2 441 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 DUSP15Q9H1R2 295 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 PPIL3Q9H2H8 161 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 MEIOCA2RUB1 952 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 PRKAR1AP10644 381 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SHC1P29353 583 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SDHAP31040 664 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 MAP2K3P46734 347 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SIRPAP78324 504 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 NNATQ16517 81 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ACSM3Q53FZ2 586 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SLC6A19Q695T7 634 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 TTLL10Q6ZVT0 673 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 METTL27Q8N6F8 245 aaPredicted RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 C19orf18Q8NEA5 215 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 OR1L3Q8NH93 324 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 GHSRQ92847 366 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 DAZLQ92904 295 aaKnown RBP11.14□□□□□ -0.63
PTPRF-212ENST00000477970 ARSGQ96EG1 525 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 SNX18Q96RF0 628 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 RNF121Q9H920 327 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 FKRPQ9H9S5 495 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 UCKL1Q9NWZ5 548 aa11.14□□□□□ -0.63
PTPRF-212ENST00000477970 GOLGA4Q13439 2230 aaKnown RBP11.13□□□□□ -0.63
PTPRF-212ENST00000477970 OR6C68A6NDL8 312 aa11.13□□□□□ -0.63
PTPRF-212ENST00000477970 HSPB2A8KAH6 182 aa11.13□□□□□ -0.63
PTPRF-212ENST00000477970 DVL2O14641 736 aa11.13□□□□□ -0.63
PTPRF-212ENST00000477970 CDC40O60508 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPRF-212ENST00000477970 CCNKO75909 580 aa11.13□□□□□ -0.63
PTPRF-212ENST00000477970 HPGDP15428 266 aa11.13□□□□□ -0.63
PTPRF-212ENST00000477970 ELK1P19419 428 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms