RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 EXOC3L4Q17RC7 722 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 FAM120AOSQ5T036 256 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 ZNF658Q5TYW1 1059 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 ATL3Q6DD88 541 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 ANKRD37Q7Z713 158 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 CYP4Z2PQ8N1L4 340 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 TMEM156Q8N614 296 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 POMGNT2Q8NAT1 580 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PLPP5Q8NEB5 264 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 OR4K1Q8NGD4 311 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 MCOLN3Q8TDD5 553 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 MOB3AQ96BX8 217 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PIK3IP1Q96FE7 263 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 DCUN1D1Q96GG9 259 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 DHTKD1Q96HY7 919 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 CABS1Q96KC9 395 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 ZFP3Q96NJ6 502 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 EGFL8Q99944 293 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PKP2Q99959 881 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PIGQQ9BRB3 760 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 TTTY12Q9BZ98 90 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 FAM129AQ9BZQ8 928 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 EXO5Q9H790 373 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 IL1RL2Q9HB29 575 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 MAN1B1Q9UKM7 699 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 CFAP45Q9UL16 551 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 WDR83OSQ9Y284 106 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 ASF1AQ9Y294 204 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 TTLL3Q9Y4R7 772 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 KLK4Q9Y5K2 254 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 AGRNO00468 2067 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 MEX3AA1L020 520 aaKnown RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 A8MXE2 369 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 VPS26AO75436 327 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 FGFR1OPO95684 399 aaKnown RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 CALB1P05937 261 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ZSCAN5DPP0CG00 497 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 IRF2P14316 349 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 UGT1A6P19224 532 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CNR1P21554 472 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CD9P21926 228 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CPT2P23786 658 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CCNCP24863 283 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ACVR1BP36896 505 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 SYKP43405 635 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 PRLHRP49683 370 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ALDH3A2P51648 485 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 DIO3P55073 304 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 SLC26A5P58743 744 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 IRX6P78412 446 aaPredicted RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 PPIDQ08752 370 aaKnown RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 SCGB2A2Q13296 93 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 PTPRCAPQ14761 206 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 PDK1Q15118 436 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 NSDHLQ15738 373 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 NDUFA9Q16795 377 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 C9orf152Q5JTZ5 239 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 FAM166AQ6J272 317 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 SLC30A6Q6NXT4 461 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 DCUN1D2Q6PH85 259 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 SCIMPQ6UWF3 145 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 DET1Q7L5Y6 550 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 LRRTM1Q86UE6 522 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 AMER3Q8N944 861 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 Q8NFD4 153 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 OR2M7Q8NG81 312 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 OR5K2Q8NHB8 316 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ZNF519Q8TB69 540 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 UCN3Q969E3 161 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ZNF486Q96H40 463 aaPredicted RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 FAM71F1Q96KD3 344 aaPredicted RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 WFIKKN1Q96NZ8 548 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 TSGA13Q96PP4 275 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 GSDMAQ96QA5 445 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 FAM173AQ9BQD7 235 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CRACR2AQ9BSW2 395 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 MED18Q9BUE0 208 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 SFXN3Q9BWM7 321 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 RAB11FIP5Q9BXF6 653 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 DEFB126Q9BYW3 111 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 WWTR1Q9GZV5 400 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 DRC3Q9H069 523 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 Q9H8V8 135 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 COG4Q9H9E3 785 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 CALHM2Q9HA72 323 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 UGT1A10Q9HAW8 530 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 QPCTLQ9NXS2 382 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 HACD3Q9P035 362 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 ADAM22Q9P0K1 906 aa3.79□□□□□ -1.8
VPS50-214ENST00000477935 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
VPS50-214ENST00000477935 SCN2AQ99250 2005 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 A0A0J9YVX5 310 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 ATP6AP2A0A1C7CYW4 349 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 A0A1W2PR80 420 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 TRBC2A0A5B9 178 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 BICDL2A1A5D9 508 aa3.78□□□□□ -1.8
VPS50-214ENST00000477935 FAM166BA8MTA8 275 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms