RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 DNAJA3Q96EY1 480 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 OTUB1Q96FW1 271 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 WWC2-AS2Q96NR7 200 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 SYT3Q9BQG1 590 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CCDC106Q9BWC9 280 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 GATA5Q9BWX5 397 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ACPTQ9BZG2 426 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MS4A7Q9GZW8 240 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 LAT2Q9GZY6 243 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CRLF2Q9HC73 371 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ACER3Q9NUN7 267 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 GIN1Q9NXP7 522 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 GRHL1Q9NZI5 618 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 PURGQ9UJV8 347 aaKnown RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 DTNAQ9Y4J8 743 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 WIPI2Q9Y4P8 454 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 RNF114Q9Y508 228 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 HMX2A2RU54 273 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 SRRM5B3KS81 715 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF587BE7ETH6 402 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TRAPPC2LH3BP13 241 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CCDC188H7C350 402 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 EIF1BO60739 113 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ULK1O75385 1050 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 OPN1MWP04001 364 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CRYBA1P05813 215 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 RPS17P08708 135 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 OPN1MW2P0DN77 364 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 OPN1MW3P0DN78 364 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 IGHV4-38-2P0DP08 117 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF35P13682 527 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TSPAN8P19075 237 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 FKBP2P26885 142 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 GLRXP35754 106 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ARR3P36575 388 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 APOBEC1P41238 236 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CLK1P49759 484 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 OR2B6P58173 313 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 COL10A1Q03692 680 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF763Q0D2J5 394 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 SKP2Q13309 424 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 PDCD1Q15116 288 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 C2orf68Q2NKX9 166 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ATP6AP1LQ52LC2 224 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TECRLQ5HYJ1 363 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 FIP1L1Q6UN15 594 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ABHD12BQ7Z5M8 362 aaPredicted RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 GLB1L3Q8NCI6 653 aaPredicted RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 BHLHE22Q8NFJ8 381 aaPredicted RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM234Q8WY98 164 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CDS1Q92903 461 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 RAB8BQ92930 207 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 PPP1R14AQ96A00 147 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 RHOVQ96L33 236 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 MS4A4EQ96PG1 132 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 STACQ99469 402 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 OR11A1Q9GZK7 315 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TCF7L1Q9HCS4 588 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 MIEF1Q9NQG6 463 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 DUSP22Q9NRW4 184 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM181Q9P2C4 612 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 ASH2LQ9UBL3 628 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 CHRNA9Q9UGM1 479 aa6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 POLR3KQ9Y2Y1 108 aaPredicted RBP6.21□□□□□ -1.42
SPTLC1-205ENST00000477888 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 MDFIC2A0A1B0GVS7 189 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PDPK1O15530 556 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 FRS3O43559 492 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SKAP2O75563 359 aaPredicted RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 FOXH1O75593 365 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 UPK3AO75631 287 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KRT33AO76009 404 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 RSL1D1O76021 490 aaKnown RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SEC31AO94979 1220 aaKnown RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 OR4F21O95013 312 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PLATP00750 562 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KRT6AP02538 564 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KRT6BP04259 564 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CSF1P09603 554 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 UBL4AP11441 157 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 IMPDH2P12268 514 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 ZNF12P17014 697 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 ATP6V1C1P21283 382 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 KRT6CP48668 564 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CCR4P51679 360 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 SLC35A1P78382 337 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CCL8P80075 99 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 BTKQ06187 659 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PAX8Q06710 450 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 NPRL3Q12980 569 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 FXNQ16595 210 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CDC73Q6P1J9 531 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 PAQR6Q6TCH4 344 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 C3orf62Q6ZUJ4 267 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 CTAGE3PQ8IX95 158 aa6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 GSPT2Q8IYD1 628 aaKnown RBP6.2□□□□□ -1.42
SPTLC1-205ENST00000477888 TMCO5AQ8N6Q1 288 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms