RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LINC00299Q6ZSB3 139 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 ADPRHL1Q8NDY3 354 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 TEAD3Q99594 435 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 GPR87Q9BY21 358 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 YIPF3Q9GZM5 350 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 MED20Q9H944 212 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 KRCC1Q9NPI7 259 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 VSX1Q9NZR4 365 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 PTRH2Q9Y3E5 179 aaKnown RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 ADAM18Q9Y3Q7 739 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 LRRC3CA6NJW4 275 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 NDUFB5O43674 189 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 GPX5O75715 221 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 PPP1R3DO95685 299 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 HMGN1P05114 100 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 CD63P08962 238 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 PPM1FP49593 454 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 FOXK1P85037 733 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 SNAPC1Q16533 368 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 CASP12Q6UXS9 341 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 ASB18Q6ZVZ8 466 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 SSX6Q7RTT6 188 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 CPOQ8IVL8 374 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 DUSP19Q8WTR2 217 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 C1GALT1C1Q96EU7 318 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 MRPL39Q9NYK5 338 aaKnown RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 NCDNQ9UBB6 729 aa10.95□□□□□ -0.66
PRPF39-203ENST00000477626 WARS2Q9UGM6 360 aaKnown RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 SIRT4Q9Y6E7 314 aaPredicted RBP10.95□□□□□ -0.66
PRPF39-203ENST00000477626 TRAV36DV7A0A075B6V5 113 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 PLPP3O14495 311 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 ZIC3O60481 467 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 REM1O75628 298 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 NDUFB2O95178 105 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 RPL18Q07020 188 aaKnown RBP10.94□□□□□ -0.66
PRPF39-203ENST00000477626 TRIP6Q15654 476 aaKnown RBP10.94□□□□□ -0.66
PRPF39-203ENST00000477626 STPG1Q5TH74 334 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 ASCL5Q7RTU5 278 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 OAFQ86UD1 273 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 PHC2Q8IXK0 858 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 TMEM41AQ96HV5 264 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 AGRPO00253 132 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 MT-ATP6P00846 226 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 SOX8P57073 446 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 BDH1Q02338 343 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 FOXO1Q12778 655 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 PCK2Q16822 640 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 TIGD6Q17RP2 521 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 EMC4Q5J8M3 183 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 CXXC5Q7LFL8 322 aaKnown RBP10.94□□□□□ -0.66
PRPF39-203ENST00000477626 METTL21AQ8WXB1 218 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 MUC6Q6W4X9 2439 aa10.94□□□□□ -0.66
PRPF39-203ENST00000477626 TMED7-TICAM2A0A0A6YYA0 188 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 A0A0G2JMM0 328 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 A0A1W2PPB8 328 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 A0A1W2PRS3 328 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 FAM183AA6NL82 134 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 KIR3DP1A8MWS1 328 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 DCTN6O00399 190 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 SNPHO15079 494 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 MSX1P28360 303 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 RFX3P48380 749 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 SGCBQ16585 318 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 HIST3H3Q16695 136 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 GXYLT1Q4G148 440 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 CADM2Q8N3J6 435 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 OR4F15Q8NGB8 312 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 MR1Q95460 341 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 NKD1Q969G9 470 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 DEPDC7Q96QD5 511 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 MND1Q9BWT6 205 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRPF39-203ENST00000477626 TMED7Q9Y3B3 224 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 LOC102725191A0A1B0GVB3 256 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 ABHD16AO95870 558 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 CH25HO95992 272 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 GADD45AP24522 165 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 PRPS1P60891 318 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 ARHGAP11AQ6P4F7 1023 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 GID4Q8IVV7 300 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 TMEM99Q8N816 258 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 PGLYRP3Q96LB9 341 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 TSPAN10Q9H1Z9 355 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-203ENST00000477626 SYNDIG1Q9H7V2 258 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 ZBTB20Q9HC78 741 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-203ENST00000477626 KLHL21Q9UJP4 597 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 PADI1Q9ULC6 663 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 YARS2Q9Y2Z4 477 aaKnown RBP10.93□□□□□ -0.66
PRPF39-203ENST00000477626 SLC6A5Q9Y345 797 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 HCRTR2O43614 444 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 KLK3P07288 261 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-203ENST00000477626 CCL3P10147 92 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 PGCP20142 388 aa10.93□□□□□ -0.66
PRPF39-203ENST00000477626 SDHAP31040 664 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms