RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	FZD8	Q9H461	694 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SMDT1	Q9H4I9	107 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMEM38A	Q9H6F2	299 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	WDCP	Q9H6R7	721 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	LRTM1	Q9HBL6	345 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	NOX3	Q9HBY0	568 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CRLF2	Q9HC73	371 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	AMBN	Q9NP70	447 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	INPP5E	Q9NRR6	644 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMEM100	Q9NV29	134 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	MED17	Q9NVC6	651 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	COMMD9	Q9P000	198 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	UPB1	Q9UBR1	384 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF69	Q9UC07	566 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	OPN4	Q9UHM6	478 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	ST3GAL5	Q9UNP4	418 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	GAB2	Q9UQC2	676 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	DHRS7	Q9Y394	339 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CHST2	Q9Y4C5	530 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCL27	Q9Y4X3	112 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TET1	Q8NFU7	2136 aa		4.34	□□□□□ -1.71
PTCD3-212	ENST00000477520	TBC1D3D	A0A087WVF3	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3I	A0A087WXS9	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3E	A0A087X179	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3K	A0A087X1G2	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRAV1-2	A0A0B4J238	106 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520		A0A1W2PPQ1	181 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GGT3P	A6NGU5	568 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM200C	A6NKL6	621 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAGEB17	A8MXT2	336 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3L	B9A6J9	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520		C9JVG2	144 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GTPBP1	O00178	669 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GPR31	O00270	319 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GABRP	O00591	440 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARPC5	O15511	151 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	EEF1E1	O43324	174 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TXNL1	O43396	289 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MBTPS2	O43462	519 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIP5K1C	O60331	668 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ECI2	O75521	394 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TOX	O94900	526 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPP14	O95059	124 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFB6	O95139	128 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PLG	P00747	810 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	JCHAIN	P01591	159 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD8A	P01732	235 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	HCK	P08631	526 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAB40AL	P0C0E4	278 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD79A	P11912	226 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TPT1	P13693	172 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MYOG	P15173	224 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FGF7	P21781	194 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GABRR1	P24046	479 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTPN6	P29350	595 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHI3L1	P36222	383 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	IFNGR2	P38484	337 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD86	P42081	329 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	XCR1	P46094	333 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SULT1E1	P49888	294 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RENBP	P51606	427 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PRKX	P51817	358 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMS	P52788	366 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ART1	P52961	327 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CRISP3	P54108	245 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDKN2D	P55273	166 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CCL23	P55773	120 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	IL2	P60568	153 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPIA	P62937	165 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FABP5	Q01469	135 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPIB	Q01892	262 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ELAVL2	Q12926	359 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPP1R8	Q12972	351 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GTF2H2	Q13888	395 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SERTAD2	Q14140	314 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	DOC2A	Q14183	400 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	IRF4	Q15306	451 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RHEB	Q15382	184 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR4D1	Q15615	310 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF630	Q2M218	657 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	DCAF4L1	Q3SXM0	396 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GGTA1P	Q4G0N0	100 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RFTN2	Q52LD8	501 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	VWA2	Q5GFL6	755 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAB41	Q5JT25	222 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SPANXN4	Q5MJ08	99 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAM74A1	Q5RGS3	127 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ATAT1	Q5SQI0	421 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GCNT6	Q5T4J0	391 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	LIPN	Q5VXI9	398 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ABLIM2	Q6H8Q1	611 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3C	Q6IPX1	549 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	HEPHL1	Q6MZM0	1159 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GTF2H2C	Q6P1K8	395 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MED27	Q6P2C8	311 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PAPD4	Q6PIY7	484 aa	Known RBP	4.33	□□□□□ -1.72

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