RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CH25HO95992 272 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 EDNRAP25101 427 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 GRPRP30550 384 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 NTF4P34130 210 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 TIMP3P35625 211 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 MAGEA2P43356 314 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 P2RY4P51582 365 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 MAP2K6P52564 334 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 H3F3AP84243 136 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 ST3GAL3Q11203 375 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 TRAM2Q15035 370 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 TMEM211Q6ICI0 200 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 PODNL1Q6PEZ8 512 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 PIWIL3Q7Z3Z3 882 aaKnown RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 SLC7A13Q8TCU3 470 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 RNF128Q8TEB7 428 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 TMEM239Q8WW34 195 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 ITLN2Q8WWU7 325 aaPredicted RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 RND1Q92730 232 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 CPNE4Q96A23 557 aaPredicted RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 SDCCAG3Q96C92 435 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 MPP4Q96JB8 637 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 PIP5K1AQ99755 562 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 FUZQ9BT04 418 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 UCK2Q9BZX2 261 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 POLR2J2Q9GZM3 115 aaKnown RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 POLR2J3Q9H1A7 115 aaKnown RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 MCTS1Q9ULC4 181 aaKnown RBP14.16□□□□□ -0.14
COPS3-207ENST00000477299 AURKCQ9UQB9 309 aa14.16□□□□□ -0.14
COPS3-207ENST00000477299 WIPF3A6NGB9 483 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 ERICH4A6NGS2 130 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 M0R082 166 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 STAMBPO95630 424 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 HPRP00739 348 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 IL2RAP01589 272 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 H1F0P07305 194 aaKnown RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 THRBP10828 461 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 MAKP20794 623 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 FKBP2P26885 142 aaKnown RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 RRM2P31350 389 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 KIR2DL2P43627 348 aaPredicted RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 CSNK2A1P68400 391 aaPredicted RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 SIRPAP78324 504 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 SLC35A1P78382 337 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 SPIBQ01892 262 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 RIPPLY2Q5TAB7 128 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 C1orf146Q5VVC0 180 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 VWA1Q6PCB0 445 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 SLC46A3Q7Z3Q1 461 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 YTHDF3Q7Z739 585 aaKnown RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 MRGPRGQ86SM5 289 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 TUSC5Q8IXB3 177 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 NRMQ8IXM6 262 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 C10orf53Q8N6V4 93 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 MFSD8Q8NHS3 518 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 ZNF417Q8TAU3 575 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 DHRS1Q96LJ7 313 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 ZNF587Q96SQ5 575 aaPredicted RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 CHID1Q9BWS9 393 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 TIGARQ9NQ88 270 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 FAM32AQ9Y421 112 aaKnown RBP14.15□□□□□ -0.14
COPS3-207ENST00000477299 DOPEY2Q9Y3R5 2298 aa14.15□□□□□ -0.14
COPS3-207ENST00000477299 FLNBO75369 2602 aaKnown RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 ENO4A6NNW6 628 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 ZNF716A6NP11 495 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 MS4A18H0YCH9 400 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 CYTIPO60759 359 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 TNFSF13O75888 250 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 GPIP06744 558 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 TMIGD3P0DMS9 266 aaPredicted RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 NQO1P15559 274 aaKnown RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 IST1P53990 364 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 PER3P56645 1201 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 RASGEF1BQ0VAM2 473 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 KPNB1Q14974 876 aaKnown RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 LAPTM4AQ15012 233 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 SF3B4Q15427 424 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■■■□□ 16.9
COPS3-207ENST00000477299 GUSBP1Q15486 140 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 ZNF74Q16587 644 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 MS4A18Q3C1V0 323 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 FAM98BQ52LJ0 330 aaKnown RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 FGD3Q5JSP0 725 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 OTUD3Q5T2D3 398 aaPredicted RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 FAM69AQ5T7M9 428 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 NUFIP2Q7Z417 695 aaKnown RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 BTLAQ7Z6A9 289 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 TMEM179BQ7Z7N9 219 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 CYP4Z1Q86W10 505 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 FAM26EQ8N5C1 309 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 RELL2Q8NC24 303 aaPredicted RBP14.14□□□□□ -0.15
COPS3-207ENST00000477299 TM9SF2Q99805 663 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 PSD2Q9BQI7 771 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 TAPBPLQ9BX59 468 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 TRIM15Q9C019 465 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 MAGIXQ9H6Y5 334 aa14.14□□□□□ -0.15
COPS3-207ENST00000477299 PAQR5Q9NXK6 330 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms