RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	GABRA1	P14867	456 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ETS2	P15036	469 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	DPP4	P27487	766 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PTPN6	P29350	595 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PCGF2	P35227	344 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	HTR3A	P46098	478 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	CPA2	P48052	419 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SLC7A2	P52569	658 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	MTPN	P58546	118 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	RPS3A	P61247	264 aa	Known RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PSME3	P61289	254 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	KCNJ10	P78508	379 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	BNIP2	Q12982	314 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	VEZF1	Q14119	521 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ODF1	Q14990	250 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TAF11	Q15544	211 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ZNF141	Q15928	474 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SYPL1	Q16563	259 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SGCB	Q16585	318 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GRAMD1B	Q3KR37	738 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GLYR1	Q49A26	553 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GTDC1	Q4AE62	458 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PDZK1	Q5T2W1	519 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	FAM91A1	Q658Y4	838 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SUMO4	Q6EEV6	95 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TMEM211	Q6ICI0	200 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	HEPHL1	Q6MZM0	1159 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	MTFR2	Q6P444	385 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	RRM2B	Q7LG56	351 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GALNT10	Q86SR1	603 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	CYP4Z1	Q86W10	505 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	C10orf67	Q8IYJ2	551 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	DEFB107A	Q8IZN7	70 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PGAM4	Q8N0Y7	254 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ANKFN1	Q8N957	763 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GATS	Q8NAP1	163 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	NFKBID	Q8NI38	313 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GRHL3	Q8TE85	626 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SLC38A5	Q8WUX1	472 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	FIG4	Q92562	907 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	NR4A3	Q92570	626 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	HGD	Q93099	445 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SNRNP40	Q96DI7	357 aa	Known RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ZHX1-C8orf76	Q96EF9	292 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	LRRC46	Q96FV0	321 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TMEM19	Q96HH6	336 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	RNF145	Q96MT1	663 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GPR137	Q96N19	417 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TTTY12	Q9BZ98	90 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PRRG4	Q9BZD6	226 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ZNF350	Q9GZX5	532 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	DEFB127	Q9H1M4	99 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	DSN1	Q9H410	356 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TMEM27	Q9HBJ8	222 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	BCL2L10	Q9HD36	194 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TIGAR	Q9NQ88	270 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ASF1B	Q9NVP2	202 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	RLIM	Q9NVW2	624 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ALKBH4	Q9NXW9	302 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TUBA8	Q9NY65	449 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TAS2R10	Q9NYW0	307 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PRPF19	Q9UMS4	504 aa	Known RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SAMD4A	Q9UPU9	718 aa	Known RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SLC9A8	Q9Y2E8	581 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	C15orf41	Q9Y2V0	281 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	FAM32A	Q9Y421	112 aa	Known RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GMEB1	Q9Y692	573 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	AKAP13	Q12802	2813 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	CHD8	Q9HCK8	2581 aa		4.07	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	DCHS1	Q96JQ0	3298 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PTPRQ	Q9UMZ3	2332 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	hCG_2014768	A0A024R1R8	64 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	NPIPA5	A0A0B4J1W7	369 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TRGV8	A0A0C4DH27	118 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289		A0A1B0GUH1	482 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ANKUB1	A6NFN9	424 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	CFAP73	A6NFT4	308 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	AGAP5	A6NIR3	686 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	NPIPA7	E9PJI5	369 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289		K7EM74	188 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289		M0QX08	132 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	GMFG	O60234	142 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	KIAA0513	O60268	411 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	FADS1	O60427	444 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	FCMR	O60667	390 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TRIM3	O75382	744 aa	Predicted RBP	4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	NME6	O75414	186 aa	Predicted RBP	4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	UGT2B17	O75795	530 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SORBS2	O94875	1100 aa	Known RBP	4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	SYNGR4	O95473	234 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	ZNF682	O95780	498 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TPO	P07202	933 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	HOXD4	P09016	255 aa	Predicted RBP	4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	TFPT	P0C1Z6	253 aa		4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	PABPC4L	P0CB38	370 aa	Known RBP	4.06	□□□□□ -1.76
NSMCE4A-208	ENST00000477289	UBTFL6	P0CB48	400 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms