RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SLC25A12O75746 678 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 INMTO95050 263 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 PEPDP12955 493 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 CYB561P49447 251 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 C19orf57Q0VDD7 668 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 TUBA3CQ13748 450 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 DOC2BQ14184 412 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 RAB39AQ14964 217 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 MEDAGQ5VYS4 303 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 TIGD3Q6B0B8 471 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 TUBA3EQ6PEY2 450 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 PSD4Q8NDX1 1056 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 ATP6V1C2Q8NEY4 427 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 TMEM41AQ96HV5 264 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 MRGPRX4Q96LA9 322 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 ERMAPQ96PL5 475 aaPredicted RBP13.05□□□□□ -0.32
COL4A6-206ENST00000477085 MYCBPQ99417 103 aaPredicted RBP13.05□□□□□ -0.32
COL4A6-206ENST00000477085 FKRPQ9H9S5 495 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 CMC2Q9NRP2 79 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
COL4A6-206ENST00000477085 PLA2G3Q9NZ20 509 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 KLK13Q9UKR3 277 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 IER3IP1Q9Y5U9 82 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 FADS2O95864 444 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 OPN1LWP04000 364 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 HIST1H1CP16403 213 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SPINK2P20155 84 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ACVR2AP27037 513 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 RPL18Q07020 188 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 IRF3Q14653 427 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PLBD1Q6P4A8 553 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 DPY19L2P2Q6ZN68 376 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 LINC00696Q6ZRV3 163 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 OR1J4Q8NGS1 313 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 MUL1Q969V5 352 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SLC25A36Q96CQ1 311 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 DDOQ99489 341 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ACOT13Q9NPJ3 140 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 CNOT2Q9NZN8 540 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 LRFN1Q9P244 771 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 LOC400499M0QZD8 3231 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 EFCAB10A6NFE3 127 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 LRRC3CA6NJW4 275 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 A6NL46 340 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PRODHO43272 600 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 EFSO43281 561 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ZNF208O43345 1280 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 MRPS14O60783 128 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SNX4O95219 450 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 WDPCPO95876 746 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 F13BP05160 661 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 RFPL3SP0C7P2 107 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 IMPDH2P12268 514 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PIPP12273 146 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SHC1P29353 583 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 NOS3P29474 1203 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 GP2P55259 537 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PRPS1P60891 318 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 GPR85P60893 370 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ERVK-25P63136 954 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 OC90Q02509 493 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ITGADQ13349 1161 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 CRMP1Q14194 572 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 TMEM44Q2T9K0 475 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 FAM69AQ5T7M9 428 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 ABHD17BQ5VST6 288 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 B3GLCTQ6Y288 498 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 FAM122BQ7Z309 247 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 GPALPP1Q8IXQ4 340 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SLC43A2Q8N370 569 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 GALNT16Q8N428 558 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 CYB561A3Q8NBI2 242 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 CLEC1AQ8NC01 280 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 MYDGFQ969H8 173 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 KATNB1Q9BVA0 655 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 HES7Q9BYE0 225 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 PRRG3Q9BZD7 231 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 CCNB1IP1Q9NPC3 277 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 KLHL1Q9NR64 748 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SACM1LQ9NTJ5 587 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 RPH3AQ9Y2J0 694 aaPredicted RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 RPL36Q9Y3U8 105 aaKnown RBP13.04□□□□□ -0.32
COL4A6-206ENST00000477085 SNX5Q9Y5X3 404 aa13.04□□□□□ -0.32
COL4A6-206ENST00000477085 H3BML4 177 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 APOL3O95236 402 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 P04436 131 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 CLUP10909 449 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 DPP4P27487 766 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 GRPRP30550 384 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 RPL4P36578 427 aaKnown RBP13.03□□□□□ -0.32
COL4A6-206ENST00000477085 TBC1D25Q3MII6 688 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 ALG10Q5BKT4 473 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms