RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 PEX19P40855 299 aa7□□□□□ -1.29
CHD6-207ENST00000476641 SELENBP1Q13228 472 aa7□□□□□ -1.29
CHD6-207ENST00000476641 NRN1LQ496H8 165 aa7□□□□□ -1.29
CHD6-207ENST00000476641 ATAD3BQ5T9A4 648 aa7□□□□□ -1.29
CHD6-207ENST00000476641 STEAP3Q658P3 488 aa7□□□□□ -1.29
CHD6-207ENST00000476641 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
CHD6-207ENST00000476641 TFAP2EQ6VUC0 442 aa7□□□□□ -1.29
CHD6-207ENST00000476641 EIF3MQ7L2H7 374 aaKnown RBP7□□□□□ -1.29
CHD6-207ENST00000476641 FCRLAQ7L513 359 aa7□□□□□ -1.29
CHD6-207ENST00000476641 CXorf67Q86X51 503 aaPredicted RBP7□□□□□ -1.29
CHD6-207ENST00000476641 VRK2Q86Y07 508 aa7□□□□□ -1.29
CHD6-207ENST00000476641 FUNDC1Q8IVP5 155 aa7□□□□□ -1.29
CHD6-207ENST00000476641 CCDC103Q8IW40 242 aa7□□□□□ -1.29
CHD6-207ENST00000476641 MSRB3Q8IXL7 192 aa7□□□□□ -1.29
CHD6-207ENST00000476641 LRRC34Q8IZ02 419 aa7□□□□□ -1.29
CHD6-207ENST00000476641 WFDC11Q8NEX6 87 aa7□□□□□ -1.29
CHD6-207ENST00000476641 VPS37AQ8NEZ2 397 aa7□□□□□ -1.29
CHD6-207ENST00000476641 OR6K3Q8NGY3 331 aa7□□□□□ -1.29
CHD6-207ENST00000476641 RAB3IL1Q8TBN0 382 aa7□□□□□ -1.29
CHD6-207ENST00000476641 MAL2Q969L2 176 aa7□□□□□ -1.29
CHD6-207ENST00000476641 PPP1R14AQ96A00 147 aa7□□□□□ -1.29
CHD6-207ENST00000476641 ATP6V1G3Q96LB4 118 aa7□□□□□ -1.29
CHD6-207ENST00000476641 ZBTB18Q99592 522 aa7□□□□□ -1.29
CHD6-207ENST00000476641 CCDC106Q9BWC9 280 aa7□□□□□ -1.29
CHD6-207ENST00000476641 ACTR6Q9GZN1 396 aa7□□□□□ -1.29
CHD6-207ENST00000476641 SEC61A2Q9H9S3 476 aa7□□□□□ -1.29
CHD6-207ENST00000476641 UBTD1Q9HAC8 227 aa7□□□□□ -1.29
CHD6-207ENST00000476641 PLSCR4Q9NRQ2 329 aa7□□□□□ -1.29
CHD6-207ENST00000476641 ACER3Q9NUN7 267 aa7□□□□□ -1.29
CHD6-207ENST00000476641 KLHL13Q9P2N7 655 aa7□□□□□ -1.29
CHD6-207ENST00000476641 PRSS50Q9UI38 385 aa7□□□□□ -1.29
CHD6-207ENST00000476641 TMEFF2Q9UIK5 374 aaPredicted RBP7□□□□□ -1.29
CHD6-207ENST00000476641 FBXL7Q9UJT9 491 aa7□□□□□ -1.29
CHD6-207ENST00000476641 CHST2Q9Y4C5 530 aa7□□□□□ -1.29
CHD6-207ENST00000476641 JMJD1CQ15652 2540 aa7□□□□□ -1.29
CHD6-207ENST00000476641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 TMEM72A0PK05 275 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 AGAP5A6NIR3 686 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 SLCO1B7G3V0H7 640 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 NR5A2O00482 541 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 CASKO14936 926 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 KLF4O43474 513 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 FRS3O43559 492 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 GCM2O75603 506 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 IGHV3-9P01782 118 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 RAF1P04049 648 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 BCHEP06276 602 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 NR2F1P10589 423 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 TFPIP10646 304 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 PRG2P13727 222 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 HOXB9P17482 250 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 RPS4Y1P22090 263 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 DNASE1P24855 282 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 CRATP43155 626 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 IDH2P48735 452 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 DIO1P49895 249 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 POLR2JP52435 117 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 AQP5P55064 265 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 KCNJ10P78508 379 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 HPCAP84074 193 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 HOXC5Q00444 222 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD6-207ENST00000476641 FOXD4Q12950 439 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 KEAP1Q14145 624 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 DEFB113Q30KQ7 82 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 SYT14P1Q58G82 188 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 C6orf10Q5SRN2 563 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 PDSS1Q5T2R2 415 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 MRPL2Q5T653 305 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 ZNF836Q6ZNA1 936 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 COMTD1Q86VU5 262 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 ADGRG3Q86Y34 549 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 KIRREL3Q8IZU9 778 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 GABRG1Q8N1C3 465 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 MIER2Q8N344 545 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 CLIP4Q8N3C7 705 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 ARFGAP2Q8N6H7 521 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 ZNF563Q8TA94 476 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 LRRC8CQ8TDW0 803 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 GTF2H4Q92759 462 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 NEUROG1Q92886 237 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 NINJ1Q92982 152 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 CPNE4Q96A23 557 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 S100PBPQ96BU1 408 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 TMEM19Q96HH6 336 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 C7orf26Q96N11 449 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 TRNT1Q96Q11 434 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 FOXC2Q99958 501 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 PSD2Q9BQI7 771 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 SLC39A3Q9BRY0 314 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 PAIP1Q9H074 479 aaKnown RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 CXXC4Q9H2H0 198 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 IKZF5Q9H5V7 419 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 TPT1P8Q9HAU6 139 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.99□□□□□ -1.29
CHD6-207ENST00000476641 ELOVL5Q9NYP7 299 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 SLC25A37Q9NYZ2 338 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 ZIM2Q9NZV7 527 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 NDRG3Q9UGV2 375 aa6.99□□□□□ -1.29
CHD6-207ENST00000476641 TMED7-TICAM2A0A0A6YYA0 188 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms