RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SCELO95171 688 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CLDN1O95832 211 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF853P0CG23 659 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF43P17038 809 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PRKACGP22612 351 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CD82P27701 267 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PRDX3P30048 256 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ETV5P41161 510 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 NAA10P41227 235 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 XCR1P46094 333 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MRPL19P49406 292 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 TMED10P49755 219 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PRKXP51817 358 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 DLX5P56178 289 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF154Q13106 437 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 IL18R1Q13478 541 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 RCAN2Q14206 197 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CYTH1Q15438 398 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CYP51A1Q16850 503 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 EIPR1Q53HC9 387 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 VWA2Q5GFL6 755 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MS4A13Q5J8X5 152 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 SOHLH1Q5JUK2 328 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 LY6G6FQ5SQ64 297 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 GPR107Q5VW38 600 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF772Q68DY9 489 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 FAM199XQ6PEV8 388 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 TTC23LQ6PF05 361 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ULK3Q6PHR2 472 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 STAC2Q6ZMT1 411 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 Q6ZSR9 355 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ASCL5Q7RTU5 278 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 DCUN1D3Q8IWE4 304 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MCOLN2Q8IZK6 566 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CMTM8Q8IZV2 173 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 TPRX1Q8N7U7 411 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 SUMF1Q8NBK3 374 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 FBXO36Q8NEA4 188 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CLHC1Q8NHS4 586 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PDCD6IPQ8WUM4 868 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 UFD1Q92890 307 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 TOMM40LQ969M1 308 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 TOP1MTQ969P6 601 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF524Q96C55 264 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ATP5SQ99766 215 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MCRIP2Q9BUT9 160 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 HINT2Q9BX68 163 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CLEC7AQ9BXN2 247 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 WDR13Q9H1Z4 485 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MOB1AQ9H8S9 216 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZC4H2Q9NQZ6 224 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF71Q9NQZ8 489 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PAK1IP1Q9NWT1 392 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 THUMPD1Q9NXG2 353 aaKnown RBP3.48□□□□□ -1.85
VPS13D-207ENST00000476169 NUDT4Q9NZJ9 180 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 CLN8Q9UBY8 286 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 DDX19BQ9UMR2 479 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 RNF24Q9Y225 148 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 ARAP3Q8WWN8 1544 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 METP08581 1390 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 MTUS2Q5JR59 1369 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 USP47Q96K76 1375 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 PLEKHH1Q9ULM0 1364 aa3.48□□□□□ -1.85
VPS13D-207ENST00000476169 NEO1Q92859 1461 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 MROH7-TTC4A0A0A0MT08 1334 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 CNTNAP2Q9UHC6 1331 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 TTC37Q6PGP7 1564 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 TRGV8A0A0C4DH27 118 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.47□□□□□ -1.85
VPS13D-207ENST00000476169 TEX48A0A1B0GUV7 120 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.47□□□□□ -1.85
VPS13D-207ENST00000476169 TMEM120BA0PK00 339 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 A8MUA0 341 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 PDZK1P1A8MUH7 402 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 BLOC1S5-TXNDC5H3BN57 136 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 SIRPB1O00241 398 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 NR5A2O00482 541 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 HSBP1O75506 76 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 OR7A10O76100 309 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 POP4O95707 220 aaKnown RBP3.47□□□□□ -1.85
VPS13D-207ENST00000476169 UBTFL1P0CB47 393 aaPredicted RBP3.47□□□□□ -1.85
VPS13D-207ENST00000476169 SELEP16581 610 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 HOXB8P17481 243 aaPredicted RBP3.47□□□□□ -1.85
VPS13D-207ENST00000476169 LCN1P31025 176 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 EPHX2P34913 555 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 SLC1A1P43005 524 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 ARHGDIAP52565 204 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 RND3P61587 244 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 PUDPQ08623 228 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 CDH17Q12864 832 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 OXA1LQ15070 435 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 HLA-BQ31612 363 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 XKR4Q5GH76 650 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 PVRIGQ6DKI7 326 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 OR52E8Q6IFG1 317 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF836Q6ZNA1 936 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 STXBP4Q6ZWJ1 553 aa3.47□□□□□ -1.85
VPS13D-207ENST00000476169 CD302Q8IX05 232 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms