RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SHOX2O60902 331 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 GMNNO75496 209 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 PRF1P14222 555 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 IFNA8P32881 189 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 OR3A2P47893 321 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 DAZAP2Q15038 168 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 P2RY6Q15077 328 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 CYBRD1Q53TN4 286 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 OR6T1Q8NGN1 323 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 OR6S1Q8NH40 331 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 MPP4Q96JB8 637 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 PCDHAC1Q9H158 963 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 OR10A4Q9H209 315 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 ZNF226Q9NYT6 803 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 ABCD2Q9UBJ2 740 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 ING1Q9UK53 422 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 ADAM21Q9UKJ8 722 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
ABCF3-211ENST00000475728 NOSIPQ9Y314 301 aaKnown RBP12.84□□□□□ -0.35
ABCF3-211ENST00000475728 ITPR3Q14573 2671 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 TRAPPC13A5PLN9 417 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 ZNF716A6NP11 495 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 CHP2O43745 196 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
ABCF3-211ENST00000475728 GSK3BP49841 420 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 CDH12P55289 794 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 ENTPD8Q5MY95 495 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 FAM69AQ5T7M9 428 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 TMEM225Q6GV28 225 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 CARM1Q86X55 608 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 CCDC103Q8IW40 242 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 STEAP2Q8NFT2 490 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 LINC01560Q8TB33 94 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 APH1AQ96BI3 265 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 DNAJA3Q96EY1 480 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 ZNF300Q96RE9 604 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-211ENST00000475728 MED18Q9BUE0 208 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 ADA2Q9NZK5 511 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 C6orf203Q9P0P8 240 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-211ENST00000475728 USP22Q9UPT9 525 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 RASD1Q9Y272 281 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 TESMINQ9Y4I5 508 aa12.83□□□□□ -0.36
ABCF3-211ENST00000475728 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
ABCF3-211ENST00000475728 A6NNC1 897 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 CXCR6O00574 342 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 TPST2O60704 377 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 MRPL33O75394 65 aaKnown RBP12.82□□□□□ -0.36
ABCF3-211ENST00000475728 AKR7A3O95154 331 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 KLK2P20151 261 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 RPS5P46782 204 aaKnown RBP12.82□□□□□ -0.36
ABCF3-211ENST00000475728 CRYBA2P53672 197 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 SELENOWP63302 87 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 MXRA7P84157 204 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 EGR4Q05215 589 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 SNTB1Q13884 538 aaKnown RBP12.82□□□□□ -0.36
ABCF3-211ENST00000475728 SLC17A1Q14916 467 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 KRT72Q14CN4 511 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 NPTX1Q15818 432 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 STAC2Q6ZMT1 411 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 Q6ZT83 130 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 TMEM200AQ86VY9 491 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 ADAMTS16Q8TE57 1224 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 SLC25A36Q96CQ1 311 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 SLC19A3Q9BZV2 496 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 ARL8BQ9NVJ2 186 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 B3GALT5Q9Y2C3 310 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 APCP25054 2843 aa12.82□□□□□ -0.36
ABCF3-211ENST00000475728 OTOGQ6ZRI0 2925 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 IGKV1D-42A0A075B6H8 117 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 FTCDNL1E5RQL4 147 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 FZD7O75084 574 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 CTAG2O75638 210 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 THRBP10828 461 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 IL32P24001 234 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 TAS2R41P59536 307 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 SPATS1Q496A3 300 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 SAMD4BQ5PRF9 694 aaKnown RBP12.81□□□□□ -0.36
ABCF3-211ENST00000475728 FBXW10Q5XX13 1052 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 TTC33Q6PID6 262 aaPredicted RBP12.81□□□□□ -0.36
ABCF3-211ENST00000475728 CASP12Q6UXS9 341 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 SSX8Q7RTT4 187 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 PGAM4Q8N0Y7 254 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 GABRG1Q8N1C3 465 aa12.81□□□□□ -0.36
ABCF3-211ENST00000475728 ADPRHL1Q8NDY3 354 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms