RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 K7EM74 188 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 SLC22A1O15245 554 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 SUSD5O60279 629 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 TRIM3O75382 744 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-217ENST00000475693 GABARAPO95166 117 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 ZNF41P51814 821 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-217ENST00000475693 MLLT10P55197 1068 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 TPD52P55327 224 aaPredicted RBP16.36■□□□□ 0.21
ATG4B-217ENST00000475693 FXYD6P3P58550 94 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 ARG2P78540 354 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 CD47Q08722 323 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 GALNTL5Q7Z4T8 443 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 TAAR8Q969N4 342 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 C1GALT1C1Q96EU7 318 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.36■□□□□ 0.21
ATG4B-217ENST00000475693 EVA1AQ9H8M9 152 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 AKIP1Q9NQ31 210 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 ALPK2Q86TB3 2170 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 IGLV3-32A0A0A0MS00 114 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 SLC1A7O00341 560 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 SNPHO15079 494 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ENDOUP21128 410 aaKnown RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 SOX8P57073 446 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 RPS3AP61247 264 aaKnown RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ITGADQ13349 1161 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 CTF1Q16619 201 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 NCCRP1Q6ZVX7 275 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 YRDCQ86U90 279 aaKnown RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 C10orf53Q8N6V4 93 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ARL5BQ96KC2 179 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 TNFRSF13CQ96RJ3 184 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 RASSF1Q9NS23 344 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 HSPE1-MOB4S4R3N1 261 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 PTPRQQ9UMZ3 2332 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 OR5H15A6NDH6 313 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 BCKDKO14874 412 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ZIC3O60481 467 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 MRPS14O60783 128 aaKnown RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 OSMP13725 252 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ACVR2AP27037 513 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 DPP4P27487 766 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 SHC1P29353 583 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 CASRP41180 1078 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 CRISP1P54107 249 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 FOXO1Q12778 655 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 TSPAN31Q12999 210 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 AQP6Q13520 282 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 SPCS2Q15005 226 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 TRIM16LQ309B1 348 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 GRINAQ7Z429 371 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 GABARAPL3Q9BY60 117 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 ABI3Q9P2A4 366 aa16.35■□□□□ 0.21
ATG4B-217ENST00000475693 WARS2Q9UGM6 360 aaKnown RBP16.35■□□□□ 0.21
ATG4B-217ENST00000475693 CELA3AP09093 270 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 CNR1P21554 472 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 OPRL1P41146 370 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 POLR2HP52434 150 aaKnown RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 CXCR4P61073 352 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 TLE3Q04726 772 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 MFAP5Q13361 173 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 FHL1Q13642 323 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 CTU2Q2VPK5 515 aaKnown RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 LAIR2Q6ISS4 152 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 ACSM5Q6NUN0 579 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 TMEM81Q6P7N7 255 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 THSD4Q6ZMP0 1018 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 DND1Q8IYX4 353 aaKnown RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 SLC25A36Q96CQ1 311 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 SAMD8Q96LT4 415 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 HS6ST2Q96MM7 605 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 GMPPBQ9Y5P6 360 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 ZNF99A8MXY4 864 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 PDGFAP04085 211 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 PNMTP11086 282 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 IDUAP35475 653 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 SLC46A3Q7Z3Q1 461 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 RNF113BQ8IZP6 322 aaKnown RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 MDS2Q8NDY4 140 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 SETD9Q8NE22 299 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 OR2M7Q8NG81 312 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 CNIH3Q8TBE1 160 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 INIPQ9NRY2 104 aa16.34■□□□□ 0.21
ATG4B-217ENST00000475693 NDRG4Q9ULP0 352 aaKnown RBP16.34■□□□□ 0.21
ATG4B-217ENST00000475693 UNC119BA6NIH7 251 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 FAM166BA8MTA8 275 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 EFCAB9A8MZ26 197 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 TAF4O00268 1085 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 TRAPPC6AO75865 159 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 SP1P08047 785 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 HK1P19367 917 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 FPR3P25089 353 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 MSX1P28360 303 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 IFNGR2P38484 337 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 GP2P55259 537 aaKnown RBP16.33■□□□□ 0.2
ATG4B-217ENST00000475693 PTGES2Q9H7Z7 377 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 NBEAQ8NFP9 2946 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 H0YC42 278 aa16.33■□□□□ 0.2
ATG4B-217ENST00000475693 SNX4O95219 450 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms