RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PLEKHF1Q96S99 279 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 COPS8Q99627 209 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 CITED1Q99966 193 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 LRRN3Q9H3W5 708 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 SPRR3Q9UBC9 169 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 CYTH4Q9UIA0 394 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 CFAP45Q9UL16 551 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 SAMD4AQ9UPU9 718 aaKnown RBP4.13□□□□□ -1.75
SMC5-203ENST00000475540 PPIAL4EA0A075B759 164 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 BTBD17A6NE02 478 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 M0QX08 132 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 ABCD4O14678 606 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 LRATO95237 230 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 H2BFMP0C1H6 154 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 PPIAL4FP0DN26 164 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 NCK1P16333 377 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 CYP2B6P20813 491 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 VDAC1P21796 283 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 HOXD10P28358 340 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 NMT1P30419 496 aaKnown RBP4.12□□□□□ -1.75
SMC5-203ENST00000475540 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
SMC5-203ENST00000475540 CAV2P51636 162 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 C21orf59P57076 290 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 TIMM10P62072 90 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 VLDLRP98155 873 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 DMTNQ08495 405 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 DOC2AQ14183 400 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 CHI3L2Q15782 390 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 XKR7Q5GH72 579 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 OR2A2Q6IF42 318 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 PDCL2Q8N4E4 241 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 BPIFCQ8NFQ6 507 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 OR51G2Q8NGK0 314 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 OR1L4Q8NGR5 311 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 OR2A12Q8NGT7 310 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 TMEM185BQ9H7F4 350 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 AUNIPQ9H7T9 357 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 POLE4Q9NR33 117 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 MARCH5Q9NX47 278 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 OR1A1Q9P1Q5 309 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 ANAPC7Q9UJX3 599 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 NEU3Q9UQ49 428 aa4.12□□□□□ -1.75
SMC5-203ENST00000475540 ATP10AO60312 1499 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 C9JVG2 144 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 GOLGA8SH3BPF8 625 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 K7ENP7 123 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 CRYGBP07316 175 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 OR8G3PP0DMU2 310 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 MCF2P10911 925 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 BCKDHAP12694 445 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 CASP14P31944 242 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 HPCAL1P37235 193 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 TPMTP51580 245 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 RGS8P57771 180 aaPredicted RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 EIF3EP60228 445 aaKnown RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 RPS15P62841 145 aaKnown RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 BST2Q10589 180 aaKnown RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 MAB21L1Q13394 359 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 DPYSL3Q14195 570 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 KLHL40Q2TBA0 621 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 PDZK1Q5T2W1 519 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 RNASEKQ6P5S7 137 aaKnown RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 TMEM107Q6UX40 140 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 DNM1P46Q6ZS02 220 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 UTS2BQ765I0 119 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 ZNF589Q86UQ0 364 aaPredicted RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 SERPINA9Q86WD7 417 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 FAM83FQ8NEG4 500 aaPredicted RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 OR10A7Q8NGE5 316 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 ISG20Q96AZ6 181 aaKnown RBP4.11□□□□□ -1.75
SMC5-203ENST00000475540 C10orf35Q96D05 121 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 SDSLQ96GA7 329 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 BPIFA3Q9BQP9 254 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 CENPKQ9BS16 269 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 GLIPR2Q9H4G4 154 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 XKR8Q9H6D3 395 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 PISDQ9UG56 409 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 NINLQ9Y2I6 1382 aa4.11□□□□□ -1.75
SMC5-203ENST00000475540 MSH4O15457 936 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 POLR2DO15514 142 aaKnown RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 DFNA5O60443 496 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 CA11O75493 328 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 OTCP00480 354 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 HBQ1P09105 142 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 OR8U8P0C7N1 319 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 TNNI1P19237 187 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 GNPDA1P46926 289 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 P2RY1P47900 373 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 EFNB2P52799 333 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 OGDHQ02218 1023 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 BDH1Q02338 343 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 ENPEPQ07075 957 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 DNAJC3Q13217 504 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 BEND3Q5T5X7 828 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 TTC19Q6DKK2 380 aaPredicted RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 EIF3MQ7L2H7 374 aaKnown RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 H2BFWTQ7Z2G1 175 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 ALLCQ8N6M5 410 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 ZSCAN4Q8NAM6 433 aaPredicted RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 MFSD9Q8NBP5 474 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms