RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ALG12Q9BV10 488 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 TMEM117Q9H0C3 514 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 TMOD2Q9NZR1 351 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 GNPTGQ9UJJ9 305 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 KDRP35968 1356 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 PPIAL4EA0A075B759 164 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 BTN3A3O00478 584 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 NEBLO76041 1014 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 GUCA1CO95843 209 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 PPIAL4FP0DN26 164 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ICAM2P13598 275 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 HPCAL1P37235 193 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 KLK7P49862 253 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 EFNB2P52799 333 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ELP6Q0PNE2 266 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ARL6IP1Q15041 203 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 TAF7Q15545 349 aaPredicted RBP2.37□□□□□ -2.03
LTN1-204ENST00000475344 PDK4Q16654 411 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 FAM83EQ2M2I3 478 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 NADK2Q4G0N4 442 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 CCDC137Q6PK04 289 aaKnown RBP2.37□□□□□ -2.03
LTN1-204ENST00000475344 ZNF836Q6ZNA1 936 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ZNF621Q6ZSS3 439 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ACOT1Q86TX2 421 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 LRRC43Q8N309 656 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 KIR3DL3Q8N743 410 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 STXBP6Q8NFX7 210 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 OR51G2Q8NGK0 314 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 OR56B4Q8NH76 319 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 ACER1Q8TDN7 264 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 GIMAP1Q8WWP7 306 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 OSTF1Q92882 214 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 TSGA13Q96PP4 275 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 OR11A1Q9GZK7 315 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 LHX9Q9NQ69 397 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 INPP5EQ9NRR6 644 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 SH3BGRL2Q9UJC5 107 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 RPH3ALQ9UNE2 315 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 V9GY05 133 aa2.37□□□□□ -2.03
LTN1-204ENST00000475344 A0A0U1RQS6 177 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 A6NIZ1 184 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 TAPBPO15533 448 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 RS1O15537 224 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 PRKYO43930 277 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 N4BP1O75113 896 aaKnown RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 RHOBTB1O94844 696 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 LRATO95237 230 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 CA1P00915 261 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 IGHG4P01861 327 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 ZNF14P17017 642 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 CA8P35219 290 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 NMUP48645 174 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 TDO2P48775 406 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 PRKXP51817 358 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 CRISP3P54108 245 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 RAP1BP61224 184 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 CBX1P83916 185 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 CNTN2Q02246 1040 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 KLHL30Q0D2K2 578 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 SNTB2Q13425 540 aaKnown RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 RIPK1Q13546 671 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 MXD4Q14582 209 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 GANABQ14697 944 aaKnown RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 C1orf100Q5SVJ3 147 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 BEND3Q5T5X7 828 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 C11orf71Q6IPW1 123 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 ZNF683Q8IZ20 524 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 OR51S1Q8NGJ8 323 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 ARPC1AQ92747 370 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 RPL3LQ92901 407 aaKnown RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 CCNL2Q96S94 520 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 SPIN2AQ99865 258 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 SPIN2BQ9BPZ2 258 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 ZNF2Q9BSG1 426 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 NAT9Q9BTE0 207 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 NXF5Q9H1B4 397 aaKnown RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 IFI27L2Q9H2X8 130 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 RHBGQ9H310 441 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 MEAF6Q9HAF1 191 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 ELOVL3Q9HB03 270 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 SLC25A37Q9NYZ2 338 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 RNF14Q9UBS8 474 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 TRAF3IP3Q9Y228 551 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 TRAPPC4Q9Y296 219 aa2.36□□□□□ -2.03
LTN1-204ENST00000475344 NUP214P35658 2090 aaPredicted RBP2.36□□□□□ -2.03
LTN1-204ENST00000475344 IQANK1A0A1B0GTG1 560 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 VSTM2BA6NLU5 285 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 G3V4G9 280 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 XPO1O14980 1071 aaKnown RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 LGALS2P05162 132 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 RPA2P15927 270 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 ATP6V1C1P21283 382 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 FGF9P31371 208 aaPredicted RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 RGS4P49798 205 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 DAP3P51398 398 aaKnown RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 USH1GQ495M9 461 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 ABCA11PQ4W5N1 156 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 C5orf47Q569G3 176 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 TMEM225Q6GV28 225 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 PYHIN1Q6K0P9 492 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms