RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ARL6IP1Q15041 203 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 FRMPD2BQ6IN97 320 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 KIAA0907Q7Z7F0 614 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 LKAAEAR1Q8TD35 194 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TWSG1Q9GZX9 223 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 DUSP13Q9UII6 198 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 NME7Q9Y5B8 376 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 AFF3P51826 1226 aaKnown RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 ATP1B3P54709 279 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 IKZF1Q13422 519 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 UBE2NLQ5JXB2 153 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 LINC00346Q8IVM7 164 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 AGBL5Q8NDL9 886 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.789e-7■■■□□ 15.1
VAPB-204ENST00000475243 GALNT9Q9HCQ5 603 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 GNG13Q9P2W3 67 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 EMC9Q9Y3B6 208 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 A0A1B0GUL6 1792 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZBTB42B2RXF5 422 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TMEM189-UBE2V1I3L0A0 370 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 SLC43A1O75387 559 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 RPS2P15880 293 aaKnown RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 SSR4P51571 173 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TRA2BP62995 288 aaKnown RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 COX20Q5RI15 118 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 RABEPKQ7Z6M1 372 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 PGBD5Q8N414 524 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 KLHDC9Q8NEP7 349 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 HRASLSQ9HDD0 168 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 PRSS16Q9NQE7 514 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZNF281Q9Y2X9 895 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TK1P04183 234 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 MAKP20794 623 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 CHRNB4P30926 498 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 NKX6-1P78426 367 aaPredicted RBP10.2□□□□□ -0.78
VAPB-204ENST00000475243 GLB1L2Q8IW92 636 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 MFSD9Q8NBP5 474 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZNF740Q8NDX6 193 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 OR2T11Q8NH01 316 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 TFAP2CQ92754 450 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 OR14A2Q96R54 314 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 ZFP57Q9NU63 452 aa10.2□□□□□ -0.78
VAPB-204ENST00000475243 GMDSO60547 372 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 IMPA1P29218 277 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ZNF684Q5T5D7 378 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 OPN5Q6U736 354 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 CBLL1Q75N03 491 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ZNF595Q8IYB9 648 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 BPIFB2Q8N4F0 458 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 MRPL38Q96DV4 380 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 TNFRSF13CQ96RJ3 184 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 CD300AQ9UGN4 299 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ITGB4P16144 1822 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ICE1Q9Y2F5 2266 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 A8MXE2 369 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 GFRA2O00451 464 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PTHP01270 115 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ACP2P11117 423 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 RPA2P15927 270 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TAS2R31P59538 309 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PTCRAQ6ISU1 281 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 NOXA1Q86UR1 476 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 GIMAP1Q8WWP7 306 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 GGHQ92820 318 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 RNF32Q9H0A6 362 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PTPRZ1P23471 2315 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 METTL15A6NJ78 407 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SLC34A2O95436 690 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 IGHV3-9P01782 118 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ITGAMP11215 1152 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TM4SF4P48230 202 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 BIDP55957 195 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TRNP1Q6NT89 227 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 LILRA3Q8N6C8 439 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 PLEKHM1Q9Y4G2 1056 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 D6RAR5 112 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 DNAJB6O75190 326 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 UTS2O95399 124 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TPT1P13693 172 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 HOXA9P31269 272 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SLC6A19Q695T7 634 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ZNF546Q86UE3 836 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SUMF2Q8NBJ7 301 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ARRDC2Q8TBH0 407 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SECTM1Q8WVN6 248 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 SGK3Q96BR1 496 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SELENOIQ9C0D9 397 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 C20orf27Q9GZN8 174 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PRMT8Q9NR22 394 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 GMPR2Q9P2T1 348 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 FUOMA2VDF0 154 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 HSBP1L1C9JCN9 74 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 PRAMEF4O60810 478 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 CLN5O75503 358 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ICAM2P13598 275 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms