RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PON3Q15166 354 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PGGHGQ32M88 737 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 GXYLT1Q4G148 440 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 AARDQ4LEZ3 155 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF311Q5JNZ3 666 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 REEP3Q6NUK4 255 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ANKRD16Q6P6B7 361 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 USP30Q70CQ3 517 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 GRASPQ7Z6J2 395 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 LHFPL1Q86WI0 220 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR4N4Q8N0Y3 316 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM99Q8N816 258 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MITD1Q8WV92 249 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 BOD1Q96IK1 185 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF668Q96K58 619 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF681Q96N22 645 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 NECAB3Q96P71 396 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF385AQ96PM9 386 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.74□□□□□ -1.81
USP16-205ENST00000474835 PARP11Q9NR21 331 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CMC2Q9NRP2 79 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SEMA3GQ9NS98 782 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM242Q9NWH2 141 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PARPBPQ9NWS1 579 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MARCH5Q9NX47 278 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LPAR3Q9UBY5 353 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 DUSP12Q9UNI6 340 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SLC22A14Q9Y267 594 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FIS1Q9Y3D6 152 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SPIN1Q9Y657 262 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 LAMA1P25391 3075 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM210A6NLX4 147 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 IFITM5A6NNB3 132 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ADAM10O14672 748 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 SNAI1O95863 264 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 MT-ND4P03905 459 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CHRM4P08173 479 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 APEHP13798 732 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 ADORA2BP29275 332 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FNTBP49356 437 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SULT1A2P50226 295 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SGSHP51688 502 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TSPAN5P62079 268 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SPIBQ01892 262 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PJVKQ0ZLH3 352 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FOXO1Q12778 655 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM176BQ3YBM2 270 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 MARC1Q5VT66 337 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TRIQKQ629K1 86 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MBOAT2Q6ZWT7 520 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TSPAN33Q86UF1 283 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM17Q86X19 198 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 GID4Q8IVV7 300 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 COL27A1Q8IZC6 1860 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 TCEANCQ8N8B7 351 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 AGBL5Q8NDL9 886 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR4E2Q8NGC2 313 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR9Q1Q8NGQ5 310 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR13D1Q8NGV5 346 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR52I2Q8NH67 350 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR10J5Q8NHC4 309 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM159Q96B96 161 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OTUB1Q96FW1 271 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 SUSD3Q96L08 255 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LINC00615Q96LM1 132 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 MAP3K3Q99759 626 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PINK1Q9BXM7 581 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ACTRT3Q9BYD9 372 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LAT2Q9GZY6 243 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SAV1Q9H4B6 383 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 DMRT3Q9NQL9 472 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SLC35C2Q9NQQ7 365 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR6C2Q9NZP2 312 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF629Q9UEG4 869 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 ADAM29Q9UKF5 820 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 BAIAP2Q9UQB8 552 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MRPS7Q9Y2R9 242 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 VPS13AQ96RL7 3174 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TRBC2A0A5B9 178 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF860A6NHJ4 632 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 C5orf58C9J3I9 102 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LRRN3E7EW58 273 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 H7BY64 318 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 GPR39O43194 453 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 EEF1E1O43324 174 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 PRICKLE3O43900 615 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 RAB40ALP0C0E4 278 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 RNF224P0DH78 156 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ESDP10768 282 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF3P17036 446 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 POU1F1P28069 291 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR1E1P30953 314 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 GDF5P43026 501 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR1E2P47887 323 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 RBP2P50120 134 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 NPY4RP50391 375 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SLC35A1P78382 337 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 RBBP7Q16576 425 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 DCAF10Q5QP82 559 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms