RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 CA10Q9NS85 328 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 OSGIN1Q9UJX0 560 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 LRP5LA4QPB2 252 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 TCF21O43680 179 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 RRP9O43818 475 aaKnown RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 AKR7A3O95154 331 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 CRYAAP02489 173 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 PGRP06401 933 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 UQCRC2P22695 453 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 PLAURQ03405 335 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 CEACAM7Q14002 265 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 OR7A5Q15622 319 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 PDCD2Q16342 344 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 PAQR6Q6TCH4 344 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 ABHD12BQ7Z5M8 362 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 POMGNT2Q8NAT1 580 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 OR9K2Q8NGE7 335 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 AURKBQ96GD4 344 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 ZNF385AQ96PM9 386 aaKnown RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 ALKBH3Q96Q83 286 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 DPY30Q9C005 99 aa12.19□□□□□ -0.46
CCDC78-209ENST00000474647 MARCOQ9UEW3 520 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-209ENST00000474647 ZNF587BE7ETH6 402 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 ZNF208O43345 1280 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 SCN2BO60939 215 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 LGI1O95970 557 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 GPIP06744 558 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 OR4A8P0C604 315 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 UQCRBP14927 111 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 ITGA2P17301 1181 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 SRP14P37108 136 aaKnown RBP12.18□□□□□ -0.46
CCDC78-209ENST00000474647 UBE2NP61088 152 aaKnown RBP12.18□□□□□ -0.46
CCDC78-209ENST00000474647 TUBA1BP68363 451 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 TUBA4AP68366 448 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 EMX2Q04743 252 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 LGALS3BPQ08380 585 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 TBRG1Q3YBR2 411 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 SAXO2Q658L1 398 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 TUBA1AQ71U36 451 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 NUDCD3Q8IVD9 361 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 ZNF540Q8NDQ6 660 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 OR8J2Q8NGG1 315 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 OR1K1Q8NGR3 316 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 WDR60Q8WVS4 1066 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 PMM1Q92871 262 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 C1orf159Q96HA4 380 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 PAIP2Q9BPZ3 127 aaKnown RBP12.18□□□□□ -0.46
CCDC78-209ENST00000474647 SLC35A5Q9BS91 424 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 KATNB1Q9BVA0 655 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 SAP130Q9H0E3 1048 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 TMEM45AQ9NWC5 275 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 ADPRHL2Q9NX46 363 aa12.18□□□□□ -0.46
CCDC78-209ENST00000474647 A0A096LPE4 126 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 PRAMEF27A3QJZ7 478 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 B9A039 149 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 NR5A2O00482 541 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 GUSBP08236 651 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 CXCR1P25024 350 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
CCDC78-209ENST00000474647 IL2RGP31785 369 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 SERPINB5P36952 375 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 SLC1A3P43003 542 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 ADIPOQQ15848 244 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 SYPL1Q16563 259 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 ANXA8L1Q5VT79 327 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 RFLNBQ8N5W9 214 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 ANKFN1Q8N957 763 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 VPS37AQ8NEZ2 397 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 SNX18Q96RF0 628 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 RAB1BQ9H0U4 201 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
CCDC78-209ENST00000474647 ASIC5Q9NY37 505 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 FAM53CQ9NYF3 392 aa12.17□□□□□ -0.46
CCDC78-209ENST00000474647 PRSS51A0A1B0GVH4 220 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 AQP7P3A6NL99 342 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 HMGN4O00479 90 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 PDE5AO76074 875 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SNUPNO95149 360 aaKnown RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 STAMBPO95630 424 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 C1QCP02747 245 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SERPINE1P05121 402 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CECR9P0C854 216 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 DAOP14920 347 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 IL7RP16871 459 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 BGNP21810 368 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CALCRP30988 508 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 SELENOPP49908 381 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 PPOXP50336 477 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 IDH3GP51553 393 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-209ENST00000474647 CHN2P52757 468 aa12.16□□□□□ -0.46
CCDC78-209ENST00000474647 NAAAQ02083 359 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms