RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NPPAP01160 153 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 IGHV1-2P23083 117 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 RGS8P57771 180 aaPredicted RBP18.1■□□□□ 0.49
SNX13-206ENST00000474067 CYLC2Q14093 348 aaPredicted RBP18.1■□□□□ 0.49
SNX13-206ENST00000474067 RUNDC3AQ59EK9 446 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 ULK3Q6PHR2 472 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 C6orf89Q6UWU4 347 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 ATG4DQ86TL0 474 aaPredicted RBP18.1■□□□□ 0.49
SNX13-206ENST00000474067 ARMC8Q8IUR7 673 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 CCDC103Q8IW40 242 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 OR52E4Q8NGH9 312 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 SLC38A4Q969I6 547 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 SLC47A1Q96FL8 570 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 ANKRD27Q96NW4 1050 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 HS3ST6Q96QI5 342 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 CGREF1Q99674 301 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 ADPRHL2Q9NX46 363 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 F8P00451 2351 aa18.1■□□□□ 0.49
SNX13-206ENST00000474067 BBIP1A8MTZ0 92 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 CLOCKO15516 846 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 FRS3O43559 492 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 AKAP8O43823 692 aaKnown RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 LOXP28300 417 aaPredicted RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 ADSLP30566 484 aaPredicted RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 FAPQ12884 760 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 MMEL1Q495T6 779 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 SWT1Q5T5J6 900 aaKnown RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 KLHL24Q6TFL4 600 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 C22orf34Q6ZV56 151 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 AAED1Q7RTV5 226 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 PATL1Q86TB9 770 aaKnown RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 GPAT4Q86UL3 456 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 MSRB3Q8IXL7 192 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 ZNF433Q8N7K0 673 aaPredicted RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 GTPBP3Q969Y2 492 aaKnown RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 THOC1Q96FV9 657 aaKnown RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 CPPED1Q9BRF8 314 aaPredicted RBP18.09■□□□□ 0.49
SNX13-206ENST00000474067 SLAMF8Q9P0V8 285 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 AMDHD2Q9Y303 409 aa18.09■□□□□ 0.49
SNX13-206ENST00000474067 ZC3H12DA2A288 527 aaKnown RBP18.08■□□□□ 0.48
SNX13-206ENST00000474067 TMEM229AB2RXF0 380 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 SASH3O75995 380 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 AKR7A3O95154 331 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 C8BP07358 591 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 ARFIP2P53365 341 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 RPS4XP62701 263 aaKnown RBP18.08■□□□□ 0.48
SNX13-206ENST00000474067 COQ5Q5HYK3 327 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 ALG10BQ5I7T1 473 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 FAM69AQ5T7M9 428 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 DLEU7Q6UYE1 221 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 OR9K2Q8NGE7 335 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 SLC26A7Q8TE54 656 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 AKAP1Q92667 903 aaKnown RBP eCLIP18.08■□□□□ 0.48
SNX13-206ENST00000474067 DNAJA3Q96EY1 480 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 TRMT61AQ96FX7 289 aaKnown RBP18.08■□□□□ 0.48
SNX13-206ENST00000474067 TMEM120AQ9BXJ8 343 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 GSX2Q9BZM3 304 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 SLCO5A1Q9H2Y9 848 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.48
SNX13-206ENST00000474067 NPIPB7O75200 414 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 RAD51DO75771 328 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 WNT11O96014 354 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 PRG2P13727 222 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 PTAFRP25105 342 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 MPGP29372 298 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 FOXD4Q12950 439 aaPredicted RBP18.07■□□□□ 0.48
SNX13-206ENST00000474067 TSC22D1Q15714 1073 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 TMEM99Q8N816 258 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 PCYOX1LQ8NBM8 494 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 OR6S1Q8NH40 331 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 ZNF317Q96PQ6 595 aaPredicted RBP18.07■□□□□ 0.48
SNX13-206ENST00000474067 BDH2Q9BUT1 245 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 ALG2Q9H553 416 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 OBP2BQ9NPH6 170 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 CORINQ9Y5Q5 1042 aa18.07■□□□□ 0.48
SNX13-206ENST00000474067 AKAP6Q13023 2319 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 MED13LQ71F56 2210 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 PRRC2AP48634 2157 aaKnown RBP18.06■□□□□ 0.48
SNX13-206ENST00000474067 AIM2O14862 343 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 FMO6PO60774 539 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 IGHV3-9P01782 118 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 PAX1P15863 534 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 ZNF43P17038 809 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 ETFDHQ16134 617 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 TRMT5Q32P41 509 aaKnown RBP18.06■□□□□ 0.48
SNX13-206ENST00000474067 Q5PR19 223 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 RNF217Q8TC41 542 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 MUS81Q96NY9 551 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 B3GALT5Q9Y2C3 310 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 CHST2Q9Y4C5 530 aa18.06■□□□□ 0.48
SNX13-206ENST00000474067 TRAV36DV7A0A075B6V5 113 aa18.05■□□□□ 0.48
SNX13-206ENST00000474067 ZNF587BE7ETH6 402 aa18.05■□□□□ 0.48
SNX13-206ENST00000474067 SLC22A2O15244 555 aa18.05■□□□□ 0.48
SNX13-206ENST00000474067 SH3BGRP55822 239 aaPredicted RBP18.05■□□□□ 0.48
SNX13-206ENST00000474067 BSPH1Q075Z2 132 aa18.05■□□□□ 0.48
SNX13-206ENST00000474067 BNIP2Q12982 314 aa18.05■□□□□ 0.48
SNX13-206ENST00000474067 ZNF672Q499Z4 452 aaPredicted RBP18.05■□□□□ 0.48
SNX13-206ENST00000474067 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.05■□□□□ 0.48
SNX13-206ENST00000474067 BIVMQ86UB2 503 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms