RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 FAM168AQ92567 244 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 TEX37Q96LM6 180 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 YAE1D1Q9NRH1 226 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 TMEM45AQ9NWC5 275 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 ZNF232Q9UNY5 417 aa11.86□□□□□ -0.51
CHD3-209ENST00000473376 STAB1Q9NY15 2570 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 M0R1B8 84 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 SDHDO14521 159 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 RFXANKO14593 260 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 AP3D1O14617 1153 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 NPIPB7O75200 414 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 ALDOCP09972 364 aaKnown RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 SH3BGRP55822 239 aaPredicted RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 UFM1P61960 85 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 BST1Q10588 318 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 LARS2Q15031 903 aaKnown RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 SWI5Q1ZZU3 235 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 PDCD4Q53EL6 469 aaKnown RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 KLHL24Q6TFL4 600 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 C5orf46Q6UWT4 87 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 OR52E4Q8NGH9 312 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 STK35Q8TDR2 534 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 MAELQ96JY0 434 aaKnown RBP11.85□□□□□ -0.51
CHD3-209ENST00000473376 PPP1R36Q96LQ0 422 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 KATNB1Q9BVA0 655 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 TAPBPLQ9BX59 468 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 LINC00470Q9BZP3 86 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 C12orf10Q9HB07 376 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 RASD1Q9Y272 281 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 IFT52Q9Y366 437 aa11.85□□□□□ -0.51
CHD3-209ENST00000473376 ARPC4-TTLL3A0A0A6YYG9 625 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 A0A0G2JPF8 293 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 HNRNPCL2B2RXH8 293 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 HNRNPCL3B7ZW38 293 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
CHD3-209ENST00000473376 SNNO75324 88 aaPredicted RBP11.84□□□□□ -0.51
CHD3-209ENST00000473376 SLC22A3O75751 556 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 TFPTP0C1Z6 253 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 HNRNPCL4P0DMR1 293 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 BGNP21810 368 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 IL12AP29459 219 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 P2RY4P51582 365 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 MVDP53602 400 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 CEACAM7Q14002 265 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 MPP2Q14168 576 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 TMEM225Q6GV28 225 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 B3GLCTQ6Y288 498 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 ZNF540Q8NDQ6 660 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 OR52P1PQ8NH57 321 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 MFSD8Q8NHS3 518 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 RMND5AQ9H871 391 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 SDR39U1Q9NRG7 319 aaPredicted RBP11.84□□□□□ -0.51
CHD3-209ENST00000473376 PNPOQ9NVS9 261 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 ZIM2Q9NZV7 527 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 CRNNQ9UBG3 495 aaPredicted RBP11.84□□□□□ -0.51
CHD3-209ENST00000473376 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 FKBP7Q9Y680 259 aa11.84□□□□□ -0.51
CHD3-209ENST00000473376 CR1P17927 2039 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 LOC102725191A0A1B0GVB3 256 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
CHD3-209ENST00000473376 TMEM247A6NEH6 219 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 RPL36A-HNRNPH2H7BZ11 118 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
CHD3-209ENST00000473376 CDKN2CP42773 168 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 GZMKP49863 264 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 FOXG1P55316 489 aaPredicted RBP11.83□□□□□ -0.52
CHD3-209ENST00000473376 SPOCK1Q08629 439 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 MAPK11Q15759 364 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 EFNB3Q15768 340 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 COX20Q5RI15 118 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 ATG16L1Q676U5 607 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 CYB5R2Q6BCY4 276 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 C6orf89Q6UWU4 347 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 CREB3L2Q70SY1 520 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 TMEM99Q8N816 258 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 OR4F15Q8NGB8 312 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 SLC38A5Q8WUX1 472 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 SPATA9Q9BWV2 254 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 RAD21L1Q9H4I0 556 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 TPT1P8Q9HAU6 139 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
CHD3-209ENST00000473376 BCL2L10Q9HD36 194 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 RCE1Q9Y256 329 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 GMEB1Q9Y692 573 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 ATP23Q9Y6H3 246 aa11.83□□□□□ -0.52
CHD3-209ENST00000473376 LOC390937A0A1W2PQ73 354 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 VSTM5A8MXK1 200 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 B9A039 149 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 OR2T1O43869 369 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 AKR7A3O95154 331 aa11.82□□□□□ -0.52
CHD3-209ENST00000473376 CRYAAP02489 173 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms