RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CCNA2P20248 432 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 EPHA1P21709 976 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CTSSP25774 331 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 HTR2AP28223 471 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 TACR3P29371 465 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 SLC1A3P43003 542 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 HTR3AP46098 478 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 POLR2HP52434 150 aaKnown RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 CLDN15P56746 228 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 BNIP1Q12981 228 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 NPTX1Q15818 432 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 GLYATQ6IB77 296 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 WBP2NLQ6ICG8 309 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 GGNQ86UU5 652 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 RANBP3LQ86VV4 465 aaPredicted RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 CARM1Q86X55 608 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 RBM45Q8IUH3 476 aaKnown RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 GCNT2Q8N0V5 402 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 LILRA2Q8N149 483 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 OR52E4Q8NGH9 312 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 OR4D11Q8NGI4 311 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 OR6T1Q8NGN1 323 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 C3orf49Q96BT1 292 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CLPTM1LQ96KA5 538 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 KLHL15Q96M94 604 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 EVA1AQ9H8M9 152 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CALHM2Q9HA72 323 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 RASSF1Q9NS23 344 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CCM2LQ9NUG4 571 aaPredicted RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CLCF1Q9UBD9 225 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 RPS6KB2Q9UBS0 482 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 CHRNA9Q9UGM1 479 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 MAGEL2Q9UJ55 1249 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 OSGIN1Q9UJX0 560 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 PRPF19Q9UMS4 504 aaKnown RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 SLC9A8Q9Y2E8 581 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 SH3GLB1Q9Y371 365 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 SNX13Q9Y5W8 968 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
SMC4-213ENST00000472282 CCDC168Q8NDH2 2452 aa8.17□□□□□ -1.1
SMC4-213ENST00000472282 TMED7-TICAM2A0A0A6YYA0 188 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 A0A1B0GWA3 101 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 A0A1W2PPR1 153 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TMEM72A0PK05 275 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 CPSF4LA6NMK7 179 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 A6NNC1 897 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 EEF1E1-BLOC1S5C9J1V9 151 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TNFSF11O14788 317 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 ARPC2O15144 300 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 GYG2O15488 501 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 EEF1E1O43324 174 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 TPST2O60704 377 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TGM6O95932 706 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TFPIP10646 304 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 SLC7A1P30825 629 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 EIF1AXP47813 144 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 OR1E2P47887 323 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 RPS3AP61247 264 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 SELENOWP63302 87 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 BNIP2Q12982 314 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 BCL2A1Q16548 175 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 FXNQ16595 210 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 CTU2Q2VPK5 515 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 SPATS1Q496A3 300 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 DNAL1Q4LDG9 190 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 PPP4R4Q6NUP7 873 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 ESPNLQ6ZVH7 1005 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 VTCN1Q7Z7D3 282 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 LUZP2Q86TE4 346 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 CDC20BQ86Y33 519 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 ADGRG3Q86Y34 549 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 ARHGAP24Q8N264 748 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 OR2V1Q8NHB1 315 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 LZICQ8WZA0 190 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 INTS12Q96CB8 462 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 ADGRG7Q96K78 797 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 MCHR1Q99705 422 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TRIM2Q9C040 744 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 PCDHAC1Q9H158 963 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 COQ10BQ9H8M1 238 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 SERINC1Q9NRX5 453 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 PLEKHA6Q9Y2H5 1048 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 TMED7Q9Y3B3 224 aa8.16□□□□□ -1.1
SMC4-213ENST00000472282 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 V9GYQ6 96 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms