RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 POMGNT2Q8NAT1 580 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 OR52E4Q8NGH9 312 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 MFSD8Q8NHS3 518 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 C3orf49Q96BT1 292 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
HOXB3-206ENST00000471459 C18orf12Q96KH6 178 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 GSX2Q9BZM3 304 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 C12orf10Q9HB07 376 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 TMEM27Q9HBJ8 222 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 SLC52A3Q9NQ40 469 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 FAIMQ9NVQ4 179 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 MALT1Q9UDY8 824 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 RASD1Q9Y272 281 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
HOXB3-206ENST00000471459 RAMP1O60894 148 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 VIMP08670 466 aaKnown RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 RPS4XP62701 263 aaKnown RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 HOXC5Q00444 222 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 RBBP4Q09028 425 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 NFYCQ13952 458 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 NET1Q7Z628 596 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 YTHDF3Q7Z739 585 aaKnown RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 DHDDSQ86SQ9 333 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 ATG4DQ86TL0 474 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 BIVMQ86UB2 503 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 ARMC8Q8IUR7 673 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 MSRB3Q8IXL7 192 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 SMAP2Q8WU79 429 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 SLC25A36Q96CQ1 311 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 SLC47A1Q96FL8 570 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 ALG2Q9H553 416 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 LAMP3Q9UQV4 416 aa13.15□□□□□ -0.3
HOXB3-206ENST00000471459 MAGED1Q9Y5V3 778 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-206ENST00000471459 DPRXA6NFQ7 191 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 FRS3O43559 492 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 INHBBP09529 407 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 EDNRAP25101 427 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 PTAFRP25105 342 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 PTH2RP49190 550 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 RGS8P57771 180 aaPredicted RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 C1DQ13901 141 aaKnown RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 CYLC2Q14093 348 aaPredicted RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 DLEU7Q6UYE1 221 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 RANBP3LQ86VV4 465 aaPredicted RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 SLC30A8Q8IWU4 369 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 C17orf78Q8N4C9 275 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 DPP10Q8N608 796 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 C1orf162Q8NEQ5 155 aaPredicted RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 OR52N5Q8NH56 324 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 SLC38A4Q969I6 547 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 ANKRD27Q96NW4 1050 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 MUS81Q96NY9 551 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 EPYCQ99645 322 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 CGREF1Q99674 301 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 SH3GL1Q99961 368 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
HOXB3-206ENST00000471459 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
HOXB3-206ENST00000471459 TRBV5-3A0A0A0MS03 114 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 WNT11O96014 354 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 ZNF43P17038 809 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 PAX7P23759 505 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 MPGP29372 298 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 AQP1P29972 269 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 RPS5P46782 204 aaKnown RBP13.13□□□□□ -0.31
HOXB3-206ENST00000471459 ZNF83P51522 516 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 ATP5J2P56134 94 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 PRPS1P60891 318 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 GABRA6Q16445 453 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 INTS11Q5TA45 600 aaKnown RBP13.13□□□□□ -0.31
HOXB3-206ENST00000471459 TSPO2Q5TGU0 170 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 FAM91A1Q658Y4 838 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
HOXB3-206ENST00000471459 SLC26A7Q8TE54 656 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 Q96MF0 132 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
HOXB3-206ENST00000471459 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms