RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ZNF230Q9UIE0 474 aaPredicted RBP0.8□□□□□ -2.28
COMMD3-209ENST00000471350 FCGBPQ9Y6R7 5405 aaPredicted RBP0.8□□□□□ -2.28
COMMD3-209ENST00000471350 CARMIL1Q5VZK9 1371 aa0.8□□□□□ -2.28
COMMD3-209ENST00000471350 CFAP73A6NFT4 308 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 INS-IGF2F8WCM5 200 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 ADAM12O43184 909 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 CDRT1O95170 752 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SLC25A14O95258 325 aaPredicted RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 F10P00742 488 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 IGLV2-23P01705 113 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 LGALS2P05162 132 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 LINC00869P0C866 280 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 TLX1NBP0CAT3 122 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 PSMA2P25787 234 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 CALCRP30988 508 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 KIR3DL2P43630 455 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 CX3CR1P49238 355 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 DAP3P51398 398 aaKnown RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 HSD17B7P56937 341 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 FLI1Q01543 452 aaPredicted RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 CYTH1Q15438 398 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 MAPK6Q16659 721 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SLC5A12Q1EHB4 618 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 KRTAP6-3Q3LI67 103 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 MARCH8Q5T0T0 291 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 TMEM225Q6GV28 225 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 WDR88Q6ZMY6 472 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 PRSS41Q7RTY9 318 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SNX32Q86XE0 403 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 OSR2Q8N2R0 312 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 KIR3DL3Q8N743 410 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 ATP6V0D2Q8N8Y2 350 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 DQX1Q8TE96 717 aaKnown RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 HTR3CQ8WXA8 447 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 ATP6V1E2Q96A05 226 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 DNAJC19Q96DA6 116 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 PELI1Q96FA3 418 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 PAGE5Q96GU1 130 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SPATA13Q96N96 652 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 TMEM246Q9BRR3 403 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 GSDMCQ9BYG8 508 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SRMSQ9H3Y6 488 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 RPP21Q9H633 154 aaKnown RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 DHX33Q9H6R0 707 aaKnown RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 MID1IP1Q9NPA3 183 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 CTPS2Q9NRF8 586 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 QPCTLQ9NXS2 382 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 KCNIP1Q9NZI2 227 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 COPS3Q9UNS2 423 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 SAMHD1Q9Y3Z3 626 aaKnown RBP0.79□□□□□ -2.28
COMMD3-209ENST00000471350 GPR179Q6PRD1 2367 aa0.79□□□□□ -2.28
COMMD3-209ENST00000471350 IGKV1D-8A0A087WSZ0 117 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 PLAC8L1A1L4L8 177 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 ZNF850A8MQ14 1090 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 C16orf90A8MZG2 172 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 DCTN6O00399 190 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 UGT1A9O60656 530 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 BGLAPP02818 100 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 OPN1LWP04000 364 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 GLAP06280 429 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CCDC192P0DO97 292 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CNR1P21554 472 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 MUTP22033 750 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 AKT2P31751 481 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 PTGDSP41222 190 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 GPM6AP51674 278 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 SLC26A5P58743 744 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 PITPNAQ00169 270 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 GABPB1Q06547 395 aaPredicted RBP0.78□□□□□ -2.28
COMMD3-209ENST00000471350 PIGHQ14442 188 aaPredicted RBP0.78□□□□□ -2.28
COMMD3-209ENST00000471350 SGCAQ16586 387 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 MICBQ29980 383 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 KRTAP13-4Q3LI77 160 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 ZNF684Q5T5D7 378 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 LYPD2Q6UXB3 125 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CBWD2Q8IUF1 395 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CNTN4Q8IWV2 1026 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 LRRC43Q8N309 656 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 DHRSXQ8N5I4 330 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 RNF148Q8N7C7 305 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CNNM3Q8NE01 707 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 FAM71CQ8NEG0 241 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 OR10A7Q8NGE5 316 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 OR10G4Q8NGN3 311 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 URGCPQ8TCY9 931 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 SLC6A7Q99884 636 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 ALG12Q9BV10 488 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 DEFB127Q9H1M4 99 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 LINC00597Q9H2U6 94 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 HMG20AQ9NP66 347 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CWC25Q9NXE8 425 aaPredicted RBP0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CD84Q9UIB8 345 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 ZNF391Q9UJN7 358 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 ABCC4O15439 1325 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 FRMPD4Q14CM0 1322 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 CUX2O14529 1486 aa0.78□□□□□ -2.28
COMMD3-209ENST00000471350 SCN2AQ99250 2005 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 FAM230AA0A1W2PPH8 454 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 VSTM2BA6NLU5 285 aa0.77□□□□□ -2.29
COMMD3-209ENST00000471350 VEGFDO43915 354 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms