RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PCNX2A6NKB5 2137 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 FTCDNL1E5RQL4 147 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CDK2AP1O14519 115 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 IMPA2O14732 288 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 IDH3BO43837 385 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 FZD7O75084 574 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 INMTO95050 263 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 SLC2A10O95528 541 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 RAB36O95755 333 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ADORA3P0DMS8 318 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 LIFP15018 202 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 HK1P19367 917 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 DCKP27707 260 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ADH6P28332 368 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 NOS3P29474 1203 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 C21orf33P30042 268 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 HTR1FP30939 366 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 RPL4P36578 427 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 EIF1P41567 113 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 MTNR1AP48039 350 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 RAB40BQ12829 278 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 TMED1Q13445 227 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CRMP1Q14194 572 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 MFSD13AQ14CX5 517 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 RTP5Q14D33 572 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 SGCBQ16585 318 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
VPS52-216ENST00000471309 ALG10Q5BKT4 473 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ARMC4Q5T2S8 1044 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ZNF468Q5VIY5 522 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 B3GNTL1Q67FW5 361 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 PLBD1Q6P4A8 553 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CCDC81Q6ZN84 652 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CPOQ8IVL8 374 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 BEST3Q8N1M1 668 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 MOSPD2Q8NHP6 518 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ZNF420Q8TAQ5 688 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 POC1BQ8TC44 478 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 DDIT4LQ96D03 193 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ERMAPQ96PL5 475 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 TAPBPLQ9BX59 468 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 PROK2Q9HC23 129 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 FGF20Q9NP95 211 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 SERINC1Q9NRX5 453 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 SACM1LQ9NTJ5 587 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 ABI3Q9P2A4 366 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 RSL24D1Q9UHA3 163 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 FBXL2Q9UKC9 423 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 DIMT1Q9UNQ2 313 aaKnown RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 SPIN1Q9Y657 262 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 COMMD3-BMI1R4GMX3 469 aa8.49□□□□□ -1.05
VPS52-216ENST00000471309 CCDC160A6NGH7 325 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 SLC22A31A6NKX4 558 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 PRR23D1E9PI22 279 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 H3BSA7 217 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 TRIM3O75382 744 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 TXNDC12O95881 172 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 P04436 131 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 HIST1H2ABP04908 130 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CD14P08571 375 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 PRR23D2P0DMB1 279 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 PAICSP22234 425 aaKnown RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 ITGA3P26006 1051 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 FKBP2P26885 142 aaKnown RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 ACVR2AP27037 513 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 IDUAP35475 653 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CASRP41180 1078 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 AQP2P41181 271 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CYB561P49447 251 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 RPL18Q07020 188 aaKnown RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 SELENBP1Q13228 472 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 ITGADQ13349 1161 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 TGIF1Q15583 401 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 INPP5JQ15735 1006 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 CNPY1Q3B7I2 92 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 GXYLT1Q4G148 440 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 EMC4Q5J8M3 183 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 ZNF362Q5T0B9 420 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 SLC35F1Q5T1Q4 408 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 C1QL3Q5VWW1 255 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 TIGD3Q6B0B8 471 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 C3orf33Q6P1S2 294 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 HIST3H2AQ7L7L0 130 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 ZNF367Q7RTV3 350 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 MDGA2Q7Z553 956 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 IGFN1Q86VF2 1251 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 GTPBP8Q8N3Z3 284 aaPredicted RBP8.48□□□□□ -1.05
VPS52-216ENST00000471309 SCAIQ8N9R8 606 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 CLEC1AQ8NC01 280 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 PSD4Q8NDX1 1056 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 BBS1Q8NFJ9 593 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 OR52I1Q8NGK6 324 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 OR1J4Q8NGS1 313 aa8.48□□□□□ -1.05
VPS52-216ENST00000471309 OR5J2Q8NH18 312 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms