RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CTAGE5O15320 804 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ENTPD5O75356 428 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 VPS26AO75436 327 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 STAMBPO95630 424 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 IGLV2-23P01705 113 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 LGALS2P05162 132 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 IGKV4-1P06312 121 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 H2BFMP0C1H6 154 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 RBMY1DP0C7P1 496 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 RBMY1A1P0DJD3 496 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 POU2F1P14859 743 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ETS1P14921 441 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 FUT1P19526 365 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 NPR2P20594 1047 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 FMO3P31513 532 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 KIF5BP33176 963 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ADRA1AP35348 466 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 HPCAL1P37235 193 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ARRB1P49407 418 aaPredicted RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SPIBQ01892 262 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 REG3AQ06141 175 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SMARCB1Q12824 385 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SPP2Q13103 211 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 KIR2DS1Q14954 304 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 PDK1Q15118 436 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CYTH1Q15438 398 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ATP6AP1Q15904 470 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 UBE2SQ16763 222 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 DNLZQ5SXM8 178 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 PRR9Q5T870 116 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF880Q6PDB4 577 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CATSPER4Q7RTX7 472 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 KIAA1328Q86T90 577 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SLC26A11Q86WA9 606 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 PAQR7Q86WK9 346 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CALHM3Q86XJ0 350 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 MMAAQ8IVH4 418 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF547Q8IVP9 402 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ATP6V0D2Q8N8Y2 350 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 Q8N976 141 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 MSANTD4Q8NCY6 345 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 DENND6BQ8NEG7 585 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CCDC54Q8NEL0 328 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 OR52B4Q8NGK2 314 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 OR10G9Q8NGN4 311 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SYNPRQ8TBG9 265 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ZFP90Q8TF47 636 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 FGF11Q92914 225 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 MYLPFQ96A32 169 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 EXOSC8Q96B26 276 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 NDFIP1Q9BT67 221 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ALG12Q9BV10 488 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 DNTTIP1Q9H147 329 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 NXF5Q9H1B4 397 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SPNS1Q9H2V7 528 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CLMPQ9H6B4 373 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SUDS3Q9H7L9 328 aaPredicted RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 WDR76Q9H967 626 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 FOLH1BQ9HBA9 442 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 QPCTLQ9NXS2 382 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SIGLEC8Q9NYZ4 499 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 ATXN10Q9UBB4 475 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CLCF1Q9UBD9 225 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 STAP1Q9ULZ2 295 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 MGAT4BQ9UQ53 548 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 AK6Q9Y3D8 172 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SLC25A15Q9Y619 301 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CUX2O14529 1486 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 PLA2R1Q13018 1463 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SPAG9O60271 1321 aaKnown RBP0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CLSPNQ9HAW4 1339 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 IGSF9BQ9UPX0 1349 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 PLAC8L1A1L4L8 177 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 C7orf66A4D0T2 115 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF705GA8MUZ8 300 aaPredicted RBP0.66□□□□□ -2.3
UBXN4-207ENST00000471246 MBTPS2O43462 519 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CXCL13O43927 109 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 OR4F21O95013 312 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 RCBTB2O95199 551 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 TRIM16O95361 564 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 IGKV1D-16P01601 117 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 TLX1NBP0CAT3 122 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 PSMA2P25787 234 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CALCRP30988 508 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 GDI1P31150 447 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 GLP1RP43220 463 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 AP3M2P53677 418 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 HSD17B7P56937 341 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 RPS14P62263 151 aaKnown RBP0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CEBPEQ15744 281 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 STK11Q15831 433 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 PRSS8Q16651 343 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 PARP15Q460N3 678 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 COX19Q49B96 90 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CCDC184Q52MB2 194 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 OR2G6Q5TZ20 316 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 RAET1GQ6H3X3 334 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 LRRC8BQ6P9F7 803 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 CBLN3Q6UW01 205 aa0.66□□□□□ -2.3
UBXN4-207ENST00000471246 LYPD2Q6UXB3 125 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms