RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 POTEKPQ9BYX7 375 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 NTN4Q9HB63 628 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 HHATLQ9HCP6 504 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 USE1Q9NZ43 259 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 MAT2BQ9NZL9 334 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 MED11Q9P086 117 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 POU2F3Q9UKI9 436 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 MGAT4BQ9UQ53 548 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 ZNF780BQ9Y6R6 833 aa7.9□□□□□ -1.14
SYNGAP1-205ENST00000470232 MGAM2Q2M2H8 2515 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 A0A096LPI6 279 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 A0A0G2JK05 382 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 A0A1W2PS29 197 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 C1orf226A1L170 272 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SHISA9B4DS77 424 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 H3BMQ9 156 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 UPK1AO00322 258 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 FOXE1O00358 373 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 NDUFB5O43674 189 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 RAMP1O60894 148 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PFDN1O60925 122 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ULK1O75385 1050 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PRSS23O95084 383 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CBX7O95931 251 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CST1P01037 141 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 IL6P05231 212 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PRPS2P11908 318 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 JUNBP17275 347 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MAPK1P28482 360 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 EVI2BP34910 448 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 FEN1P39748 380 aaKnown RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SLC6A8P48029 635 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 EMDP50402 254 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PDLIM4P50479 330 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 FABP6P51161 128 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ACTG1P63261 375 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MGAT2Q10469 447 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SCGB2A2Q13296 93 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ITGADQ13349 1161 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 GGTLC2Q14390 218 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PPA1Q15181 289 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CR1LQ2VPA4 569 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 GTDC1Q4AE62 458 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 RFTN2Q52LD8 501 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SPANXN4Q5MJ08 99 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 METTL2BQ6P1Q9 378 aaKnown RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 BHLHA15Q7RTS1 189 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ZDHHC13Q8IUH4 622 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MSRB3Q8IXL7 192 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ZNF619Q8N2I2 560 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MUC15Q8N387 334 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 RNF175Q8N4F7 328 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ZNF540Q8NDQ6 660 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 OR5M1Q8NGP8 315 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 OR10A6Q8NH74 314 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 OR10D3Q8NH80 312 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CLHC1Q8NHS4 586 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 GTF2H4Q92759 462 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 HDAC2Q92769 488 aaKnown RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 GCDHQ92947 438 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MSI2Q96DH6 328 aaKnown RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 C1GALT1C1Q96EU7 318 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ITCHQ96J02 903 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 COG8Q96MW5 612 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MUS81Q96NY9 551 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 MBOAT4Q96T53 435 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 DHRS9Q9BPW9 319 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CPPED1Q9BRF8 314 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PIMREGQ9BSJ6 248 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ZNF717Q9BY31 904 aaPredicted RBP7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 TOR3AQ9H497 397 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 RMND5AQ9H871 391 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 GORASP2Q9H8Y8 452 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SMURF2Q9HAU4 748 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 TIGARQ9NQ88 270 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 C1orf109Q9NX04 203 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 VAPAQ9P0L0 249 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ADAM29Q9UKF5 820 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 OR10H1Q9Y4A9 318 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 CCL27Q9Y4X3 112 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 ORC6Q9Y5N6 252 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 SNX5Q9Y5X3 404 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 PKD1L1Q8TDX9 2849 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
SYNGAP1-205ENST00000470232 G3V2T6 193 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 H0YIV9 168 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 H7C417 338 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 ABCD4O14678 606 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 SCO2O43819 266 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 UGDHO60701 494 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 E2F6O75461 281 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 GCM2O75603 506 aaPredicted RBP7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 PRKD3O94806 890 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 SEMA3DO95025 777 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 CLDN9O95484 217 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 ADAP00813 363 aa7.88□□□□□ -1.15
SYNGAP1-205ENST00000470232 GBAP04062 536 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms