RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 HTR3AP46098 478 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 SLC1A6P48664 564 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 PDLIM4P50479 330 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 RPL14P50914 215 aaKnown RBP10.68□□□□□ -0.7
HDAC3-204ENST00000469207 P2RY4P51582 365 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 HPCAP84074 193 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 MPP2Q14168 576 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 PAQR6Q6TCH4 344 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 LRRC74BQ6ZQY2 392 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 SPATA19Q7Z5L4 167 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 WDR60Q8WVS4 1066 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 PMM1Q92871 262 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 TMEM45BQ96B21 275 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 TESCQ96BS2 214 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 TRNT1Q96Q11 434 aaKnown RBP10.68□□□□□ -0.7
HDAC3-204ENST00000469207 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-204ENST00000469207 SLC6A13Q9NSD5 602 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 ADPRHL2Q9NX46 363 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 RAP2CQ9Y3L5 183 aa10.68□□□□□ -0.7
HDAC3-204ENST00000469207 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 E9PBE3 544 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 WNT11O96014 354 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 TGFAP01135 160 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 SERPINE1P05121 402 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 GPIP06744 558 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CELA3BP08861 270 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 MYZAPP0CAP1 466 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 NR2F1P10589 423 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 BMP4P12644 408 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 SRD5A1P18405 259 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 LBPP18428 481 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 BGNP21810 368 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 RPS4Y1P22090 263 aaKnown RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CXCR1P25024 350 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CALCRP30988 508 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 SERPINF1P36955 418 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 GZMKP49863 264 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 TBRG1Q3YBR2 411 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 IQCCQ4KMZ1 466 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 TMEM225Q6GV28 225 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 FAM166AQ6J272 317 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 ANKRD16Q6P6B7 361 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 ZNF836Q6ZNA1 936 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CREB3L2Q70SY1 520 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 MYPOPQ86VE0 399 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 EPHX4Q8IUS5 362 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CLIP4Q8N3C7 705 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CADM2Q8N3J6 435 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 C17orf78Q8N4C9 275 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 C1orf162Q8NEQ5 155 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 OR1K1Q8NGR3 316 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 BCL2L2Q92843 193 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 C1orf159Q96HA4 380 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CCDC115Q96NT0 180 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 ALKBH3Q96Q83 286 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 PANX1Q96RD7 426 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 PIMREGQ9BSJ6 248 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 ROPN1BQ9BZX4 212 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 ROPN1Q9HAT0 212 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CA10Q9NS85 328 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 TMEM45AQ9NWC5 275 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 LPAR3Q9UBY5 353 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 SEC14L4Q9UDX3 406 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 BTNL2Q9UIR0 455 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 KCNS2Q9ULS6 477 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
HDAC3-204ENST00000469207 NBEAL1Q6ZS30 2694 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 KRT33AO76009 404 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 OR4A8P0C604 315 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 APEHP13798 732 aaKnown RBP10.66□□□□□ -0.7
HDAC3-204ENST00000469207 IL2RGP31785 369 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 HOXC5Q00444 222 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 ADIPOQQ15848 244 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 RPS26P11Q5JNZ5 115 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-204ENST00000469207 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 SLC46A3Q7Z3Q1 461 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 OR52P1PQ8NH57 321 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 OIT3Q8WWZ8 545 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-204ENST00000469207 ZIM3Q96PE6 472 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 SLC38A2Q96QD8 506 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 OR52E6Q96RD3 313 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 SF3B5Q9BWJ5 86 aaKnown RBP10.66□□□□□ -0.7
HDAC3-204ENST00000469207 BPESC1Q9GZL8 116 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 NELFAQ9H3P2 528 aa10.66□□□□□ -0.7
HDAC3-204ENST00000469207 SH3PXD2BA1X283 911 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 CDHR4A6H8M9 788 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 ZNF503-AS2A6NEH8 195 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 LYNX1G3V0Z9 82 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 FAAHO00519 579 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 PGRP06401 933 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 DBIP07108 87 aaKnown RBP10.65□□□□□ -0.7
HDAC3-204ENST00000469207 CSF3P09919 207 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 CECR9P0C854 216 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 LYNX1P0DP58 116 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 ETFAP13804 333 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 THBS4P35443 961 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 MVDP53602 400 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms