RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TMEM179BQ7Z7N9 219 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 CLVS1Q8IUQ0 354 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF614Q8N883 585 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 TOR1AIP2Q8NFQ8 470 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 POC1BQ8TC44 478 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ZFP90Q8TF47 636 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ADGRG7Q96K78 797 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 KLHDC3Q9BQ90 382 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ADPRHL2Q9NX46 363 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 CARD8Q9Y2G2 431 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 SERINC4A6NH21 518 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF264O43296 627 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 OIP5O43482 229 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 SEMG1P04279 462 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 UBL4AP11441 157 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 DNAJA1P31689 397 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 RANBP1P43487 201 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 PON3Q15166 354 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 GPR68Q15743 365 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 CTU2Q2VPK5 515 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 PDZK1Q5T2W1 519 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 C1QTNF12Q5T7M4 302 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 TNFAIP8L2Q6P589 184 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ESPNLQ6ZVH7 1005 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 C11orf65Q8NCR3 313 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 FAM222BQ8WU58 562 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ARSGQ96EG1 525 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 NRBF2Q96F24 287 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF845Q96IR2 970 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 HSH2DQ96JZ2 352 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 NPAS1Q99742 590 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 AMBRA1Q9C0C7 1298 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 SAP130Q9H0E3 1048 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 GPC6Q9Y625 555 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 U3KQV3 271 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 TACC2O95359 2948 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 ADAMDEC1O15204 470 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 KIAA0513O60268 411 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 FCMRO60667 390 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 UGT2B17O75795 530 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 FPR1P21462 350 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 PRKACGP22612 351 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 IGFBP5P24593 272 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 YAP1P46937 504 aaKnown RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 ANXA11P50995 505 aaKnown RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 CASP9P55211 416 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 FUT5Q11128 374 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 SGCBQ16585 318 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 TYW3Q6IPR3 259 aaKnown RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 GPR119Q8TDV5 335 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 RAB8BQ92930 207 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 RBM24Q9BX46 236 aaKnown RBP12.97□□□□□ -0.33
COL27A1-203ENST00000468565 RAD21L1Q9H4I0 556 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 KCNE5Q9UJ90 142 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 MKLN1Q9UL63 735 aa12.97□□□□□ -0.33
COL27A1-203ENST00000468565 POLQO75417 2590 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 A8MXE2 369 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 hCG_2039718K7EN88 272 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 HMGN4O00479 90 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 MSTNO14793 375 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 SLC16A6O15403 523 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 NUDT14O95848 222 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 C1QCP02747 245 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 JUNBP17275 347 aaPredicted RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 EIF1AXP47813 144 aaKnown RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 PCYT1AP49585 367 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 RNF144AP50876 292 aaPredicted RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 FOXF1Q12946 379 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 PPP1R8Q12972 351 aaKnown RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 PMS2P3Q13401 168 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 SNTB1Q13884 538 aaKnown RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 SLC25A53Q5H9E4 307 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 RNF130Q86XS8 419 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 SETD9Q8NE22 299 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 OR5W2Q8NH69 310 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 OR10D3Q8NH80 312 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 ISOC1Q96CN7 298 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 LAT2Q9GZY6 243 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 REEP1Q9H902 201 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 VNN3Q9NY84 501 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.33
COL27A1-203ENST00000468565 WDR45Q9Y484 360 aa12.96□□□□□ -0.33
COL27A1-203ENST00000468565 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.34
COL27A1-203ENST00000468565 ETV2O00321 342 aaPredicted RBP12.96□□□□□ -0.34
COL27A1-203ENST00000468565 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms