RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DEFB108AA8MXU0 73 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ZNF814B7Z6K7 855 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 C5orf58C9J3I9 102 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 FXYD1O00168 92 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 TPST1O60507 370 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 FZD7O75084 574 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 FESP07332 822 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 VIMP08670 466 aaKnown RBP9.89□□□□□ -0.83
COL4A6-205ENST00000468338 PPP3CBP16298 524 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 CRYGSP22914 178 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 SLC6A2P23975 617 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 OR3A2P47893 321 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 RBBP4Q09028 425 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 RASGEF1BQ0VAM2 473 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 KLF10Q13118 480 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 SCARB2Q14108 478 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 SELPLGQ14242 412 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 STK32CQ86UX6 486 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 COMTD1Q86VU5 262 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 LSMEM1Q8N8F7 131 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 HIPK4Q8NE63 616 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 C3orf49Q96BT1 292 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 TMPRSS13Q9BYE2 586 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.89□□□□□ -0.83
COL4A6-205ENST00000468338 GPR52Q9Y2T5 361 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 PRRC2AP48634 2157 aaKnown RBP9.89□□□□□ -0.83
COL4A6-205ENST00000468338 ALPK2Q86TB3 2170 aa9.89□□□□□ -0.83
COL4A6-205ENST00000468338 EIF1BO60739 113 aaKnown RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 RAMP1O60894 148 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 MFN2O95140 757 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 CNOT4O95628 575 aaKnown RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 NPPAP01160 153 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 TP53P04637 393 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 THBDP07204 575 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 TFPIP10646 304 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 EDNRAP25101 427 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 LOXP28300 417 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 NTF4P34130 210 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 KCNJ5P48544 419 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 MTPNP58546 118 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 COPZ1P61923 177 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 SLC35A1P78382 337 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 TRMT5Q32P41 509 aaKnown RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 C6orf89Q6UWU4 347 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 ATG4DQ86TL0 474 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 C11orf65Q8NCR3 313 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 BHLHE22Q8NFJ8 381 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 NRGNQ92686 78 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 NINJ1Q92982 152 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 DDIT4LQ96D03 193 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 ZNF300Q96RE9 604 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-205ENST00000468338 SPATA5L1Q9BVQ7 753 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 LIME1Q9H400 295 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 C12orf10Q9HB07 376 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 FANCFQ9NPI8 374 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 ZNF226Q9NYT6 803 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
COL4A6-205ENST00000468338 PRORSD1PA6NEY8 169 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 BBIP1A8MTZ0 92 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 A8MVM7 634 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CASKO14936 926 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 SLC22A2O15244 555 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 FRS3O43559 492 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 TPST2O60704 377 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 SERPINB7O75635 380 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CCNA2P20248 432 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 FPR1P21462 350 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CXCR1P25024 350 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 P2RY4P51582 365 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 EGR4Q05215 589 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 DMTNQ08495 405 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 NFYCQ13952 458 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 P2RY6Q15077 328 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 EXOC3L2Q2M3D2 409 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 SFRP5Q5T4F7 317 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 NANOGP8Q6NSW7 305 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 PAQR6Q6TCH4 344 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 Q6ZT83 130 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 GALNT5Q7Z7M9 940 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CALHM3Q86XJ0 350 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 KRT73Q86Y46 540 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CCDC103Q8IW40 242 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 PIGXQ8TBF5 258 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 LRRC58Q96CX6 371 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 ZHX1-C8orf76Q96EF9 292 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 ZNF607Q96SK3 696 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 MED18Q9BUE0 208 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 HDHD5Q9BXW7 423 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 KLHL4Q9C0H6 718 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 EVA1AQ9H8M9 152 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 NANOGQ9H9S0 305 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 CACYBPQ9HB71 228 aaKnown RBP9.87□□□□□ -0.83
COL4A6-205ENST00000468338 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
COL4A6-205ENST00000468338 MED13LQ71F56 2210 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms