RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 AQP7P3A6NL99 342 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 PRKAR1BP31321 381 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 NTF4P34130 210 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 RPS4XP62701 263 aaKnown RBP16.82■□□□□ 0.28
COL7A1-207ENST00000467985 FAPQ12884 760 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 OR7A5Q15622 319 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 AGKQ53H12 422 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 GCNT6Q5T4J0 391 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 C1QTNF12Q5T7M4 302 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 REEP3Q6NUK4 255 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 SERPINA11Q86U17 422 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 LILRB1Q8NHL6 650 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM45BQ96B21 275 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 C3orf49Q96BT1 292 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 RADILQ96JH8 1075 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 Q96MF0 132 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 CCT8L2Q96SF2 557 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 SPATA5L1Q9BVQ7 753 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 GSX1Q9H4S2 264 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-207ENST00000467985 SLC52A3Q9NQ40 469 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 UPB1Q9UBR1 384 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 LAMP3Q9UQV4 416 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 CHST2Q9Y4C5 530 aa16.82■□□□□ 0.28
COL7A1-207ENST00000467985 TLN2Q9Y4G6 2542 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 NAV3Q8IVL0 2385 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 CADP27708 2225 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 A0A1W2PP18 115 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 EVPLLA8MZ36 301 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 RAD51DO75771 328 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 VAMP5O95183 116 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 FAM107AO95990 144 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 PRG2P13727 222 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 TGFBR3Q03167 851 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 GKAP1Q5VSY0 366 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-207ENST00000467985 C1orf140Q5VVS0 124 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 KLHL17Q6TDP4 642 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM108Q6UXF1 575 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 MSRB3Q8IXL7 192 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 C1orf162Q8NEQ5 155 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-207ENST00000467985 OR9K2Q8NGE7 335 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 STK35Q8TDR2 534 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 SMAP2Q8WU79 429 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-207ENST00000467985 C10orf82Q8WW14 230 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 COX4I2Q96KJ9 171 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 TRIM2Q9C040 744 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 FAIMQ9NVQ4 179 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 MGAT4BQ9UQ53 548 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 USF3Q68DE3 2245 aa16.81■□□□□ 0.28
COL7A1-207ENST00000467985 TRBV5-3A0A0A0MS03 114 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM229AB2RXF0 380 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 PDLIM1O00151 329 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 SNX3O60493 162 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 AKR7A3O95154 331 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 ARAFP10398 606 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 ATP5J2P56134 94 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 BNIP2Q12982 314 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 KRTAP21-3Q3LHN1 58 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 PAGE3Q5JUK9 113 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM225Q6GV28 225 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 ATG4DQ86TL0 474 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-207ENST00000467985 C17orf78Q8N4C9 275 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM99Q8N816 258 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 POMGNT2Q8NAT1 580 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 NFKBIDQ8NI38 313 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 TRMT61AQ96FX7 289 aaKnown RBP16.8■□□□□ 0.28
COL7A1-207ENST00000467985 MUS81Q96NY9 551 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 C12orf10Q9HB07 376 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 VAPAQ9P0L0 249 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 SLAMF8Q9P0V8 285 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 RPS6KB2Q9UBS0 482 aa16.8■□□□□ 0.28
COL7A1-207ENST00000467985 NDUFAB1O14561 156 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 FRS3O43559 492 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 NPIPB7O75200 414 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 AHSA1O95433 338 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 ITGA5P08648 1049 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 DANCRP0C864 163 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 GPX2P18283 190 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 SLC6A2P23975 617 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 PTAFRP25105 342 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 CDK6Q00534 326 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 ETFDHQ16134 617 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 GABRA6Q16445 453 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 METTL21CQ5VZV1 264 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 DHRS4L2Q6PKH6 230 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 C5orf46Q6UWT4 87 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 CLEC9AQ6UXN8 241 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 ABHD12BQ7Z5M8 362 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-207ENST00000467985 GPAT4Q86UL3 456 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 BHLHE22Q8NFJ8 381 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-207ENST00000467985 KBTBD8Q8NFY9 601 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 MFSD8Q8NHS3 518 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 ZNF607Q96SK3 696 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 AMBRA1Q9C0C7 1298 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 TMEM38AQ9H6F2 299 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 ADPRHL2Q9NX46 363 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 NPAP1Q9NZP6 1156 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-207ENST00000467985 SLC25A15Q9Y619 301 aa16.79■□□□□ 0.28
COL7A1-207ENST00000467985 PRORSD1PA6NEY8 169 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms