RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 UBE2NLQ5JXB2 153 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HBMQ6B0K9 141 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 LCN10Q6JVE6 187 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 GAREM2Q75VX8 874 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 KANSL1Q7Z3B3 1105 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 VRK2Q86Y07 508 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 MUL1Q969V5 352 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HYLS1Q96M11 299 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 CENPOQ9BU64 300 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 INPP5EQ9NRR6 644 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PRELID1Q9Y255 219 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 V9GY05 133 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 A0A1W2PS29 197 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 OR5H15A6NDH6 313 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 OR5H14A6NHG9 310 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 OR5H1A6NKK0 313 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 SULT1C2O00338 296 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 BET1O15155 118 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 GPR39O43194 453 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 MITFO75030 526 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 HMGN2P05204 90 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 TPOP07202 933 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 SNCAP37840 140 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PRLHRP49683 370 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 MPPED2Q15777 294 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HYAL4Q2M3T9 481 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ZNF322Q6U7Q0 402 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 MEPCEQ7L2J0 689 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 SPARTQ8N0X7 666 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ITFG2Q969R8 447 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ENPP5Q9UJA9 477 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 LYRM1O43325 122 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 CSNK1EP49674 416 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 P2RX1P51575 399 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 BAXQ07812 192 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 DBPQ10586 325 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 TSSK4Q6SA08 328 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 MEX3DQ86XN8 651 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 ANKRD19PQ9H560 264 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 TUBG2Q9NRH3 451 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 BOLA2-SMG1P6H3BVE0 249 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ARPC5O15511 151 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ZNF264O43296 627 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 SMAD6O43541 496 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 DPM1O60762 260 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PRAF2O60831 178 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ATP6V1G1O75348 118 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 FOSL1P15407 271 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PSMB5P28074 263 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 CSNK1DP48730 415 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HLCSP50747 726 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 IL13RA1P78552 427 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PEA15Q15121 130 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 RNLSQ5VYX0 342 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 COX15Q7KZN9 410 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ISCA2Q86U28 154 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 BEST4Q8NFU0 473 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ACKR4Q9NPB9 350 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 KCNJ16Q9NPI9 418 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 AGPAT4Q9NRZ5 378 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 PAQR5Q9NXK6 330 aaPredicted RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 TBX21Q9UL17 535 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 CRYM-AS1A6NIL9 109 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 HSD17B1P14061 328 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 CLDN6P56747 220 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 KEAP1Q14145 624 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ACSM3Q53FZ2 586 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 ACTBL2Q562R1 376 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 RBMXL1Q96E39 390 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 C1orf198Q9H425 327 aa8.11□□□□□ -1.11
HPS4-209ENST00000466781 DDX31Q9H8H2 851 aaKnown RBP8.11□□□□□ -1.11
HPS4-209ENST00000466781 METTL15A6NJ78 407 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 H7C1Q1 480 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 MED6O75586 246 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 NXPH2O95156 264 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GPR75O95800 540 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 F10P00742 488 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ANXA7P20073 488 aaKnown RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 NFYAP23511 347 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 AHRP35869 848 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CNIH2Q6PI25 160 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ZBTB8AQ96BR9 441 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SLC6A18Q96N87 628 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 FUNDC2Q9BWH2 189 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 EGLN1Q9GZT9 426 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CSNK1G1Q9HCP0 422 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SMCO4Q9NRQ5 59 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GLTPQ9NZD2 209 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms