RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MARVELD2Q8N4S9 558 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 CLDN22Q8N7P3 220 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 FADS6Q8N9I5 356 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 OR10G2Q8NGC3 310 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 OR5AN1Q8NGI8 311 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 B4GALNT2Q8NHY0 566 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 VANGL1Q8TAA9 524 aaPredicted RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 SLC7A13Q8TCU3 470 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 MAGEE2Q8TD90 523 aaPredicted RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 GPR119Q8TDV5 335 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 DUSP19Q8WTR2 217 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 TMEM234Q8WY98 164 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 ST8SIA1Q92185 356 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 GPHA2Q96T91 129 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 FEVQ99581 238 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 BARD1Q99728 777 aaKnown RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 TMEM43Q9BTV4 400 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 GABARAPL3Q9BY60 117 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 RTN4RQ9BZR6 473 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 Q9H521 79 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 PROK2Q9HC23 129 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 KRCC1Q9NPI7 259 aaPredicted RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 HPF1Q9NWY4 346 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 FLRT3Q9NZU0 649 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 ABI3Q9P2A4 366 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 POLHQ9Y253 713 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 TMEM5Q9Y2B1 443 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 POFUT2Q9Y2G5 429 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 C15orf41Q9Y2V0 281 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 CHCHD2Q9Y6H1 151 aaPredicted RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 HEATR5AQ86XA9 2040 aa4.97□□□□□ -1.61
VPS41-211ENST00000466017 CNOT1A5YKK6 2376 aaKnown RBP4.97□□□□□ -1.61
VPS41-211ENST00000466017 A0A087WZY1 265 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TRBV4-1A0A0J9YWV2 114 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CPSF4LA6NMK7 179 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 ZNF208O43345 1280 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PTP4A3O75365 173 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CBR3O75828 277 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR6B1O95007 311 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 NTN1O95631 604 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CELA2AP08217 269 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TSPAN19P0C672 248 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 UBTFL6P0CB48 400 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 GKN3PP0CG01 181 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OSMP13725 252 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PRKACGP22612 351 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 IGFBP5P24593 272 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 FPR3P25089 353 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CAPGP40121 348 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 SOX3P41225 446 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 APOBEC1P41238 236 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 EIF1P41567 113 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 OMPP47874 163 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 RFX3P48380 749 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 IDH2P48735 452 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 SLC9A3P48764 834 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CYB561P49447 251 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PTTG1IPP53801 180 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 AQP4P55087 323 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 FBXW4P57775 412 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CXCR4P61073 352 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CDK5Q00535 292 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ZNF117Q03924 483 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 NPRL3Q12980 569 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MFAP5Q13361 173 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MED21Q13503 144 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ATP1A4Q13733 1029 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 GANABQ14697 944 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 HYAL4Q2M3T9 481 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ALG10BQ5I7T1 473 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OTUD3Q5T2D3 398 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 ABHD17BQ5VST6 288 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 IGFL4Q6B9Z1 124 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 RPL13AP3Q6NVV1 102 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PGBD2Q6P3X8 592 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TTC33Q6PID6 262 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 CBLN3Q6UW01 205 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ISLR2Q6UXK2 745 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 IL20RBQ6UXL0 311 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 C16orf47Q6ZP98 133 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 MARCH3Q86UD3 253 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MARCH9Q86YJ5 346 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PLCZ1Q86YW0 608 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 LYSMD2Q8IV50 215 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 NKAIN4Q8IVV8 208 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PRR22Q8IZ63 422 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CDK20Q8IZL9 346 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 Q8N1X5 172 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 GALNT16Q8N428 558 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 GALNT4Q8N4A0 578 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TMEM156Q8N614 296 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ZNF614Q8N883 585 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ATG16L2Q8NAA4 619 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 CLEC1AQ8NC01 280 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR2M3Q8NG83 312 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR10G3Q8NGC4 313 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR4K5Q8NGD3 323 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms