RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 MIER2Q8N344 545 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 OR9K2Q8NGE7 335 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 HTRA1Q92743 480 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 TMEM19Q96HH6 336 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
HOXB3-204ENST00000465120 SLC17A5Q9NRA2 495 aa13.56□□□□□ -0.24
HOXB3-204ENST00000465120 THUMPD1Q9NXG2 353 aaKnown RBP13.56□□□□□ -0.24
HOXB3-204ENST00000465120 A0A0G2JPF8 293 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 AQP7P3A6NL99 342 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 HNRNPCL2B2RXH8 293 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 HNRNPCL3B7ZW38 293 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 HNRNPCL1O60812 293 aaKnown RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 CRLF1O75462 422 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ERLIN1O75477 346 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 WNT11O96014 354 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ZCCHC18P0CG32 403 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 HNRNPCL4P0DMR1 293 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 BMP4P12644 408 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 MPGP29372 298 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ACAA2P42765 397 aaKnown RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 MVDP53602 400 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 PRPS1P60891 318 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 IRX1P78414 480 aaPredicted RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 KRTAP1-1Q07627 177 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ZSWIM7Q19AV6 140 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ZNF311Q5JNZ3 666 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ABHD12BQ7Z5M8 362 aaPredicted RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 CLIP4Q8N3C7 705 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 OR9I1Q8NGQ6 314 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 SLC25A36Q96CQ1 311 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 MAELQ96JY0 434 aaKnown RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
HOXB3-204ENST00000465120 HEATR1Q9H583 2144 aaKnown RBP13.55□□□□□ -0.24
HOXB3-204ENST00000465120 C5orf58C9J3I9 102 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PDLIM1O00151 329 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 KLF11O14901 512 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 THBS1P07996 1170 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PRG2P13727 222 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
HOXB3-204ENST00000465120 SLC18A1P54219 525 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 STX1BP61266 288 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 CHRNB3Q05901 458 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PRAMEF8Q5VWM4 474 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PRAMEF7Q5VXH5 474 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 ZNF544Q6NX49 715 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 B3GLCTQ6Y288 498 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 MSANTD1Q6ZTZ1 278 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 SERPINA11Q86U17 422 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 TMEM45BQ96B21 275 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 MDFIQ99750 246 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 RAD21L1Q9H4I0 556 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 SDR39U1Q9NRG7 319 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-204ENST00000465120 TMEM45AQ9NWC5 275 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 RPS6KB2Q9UBS0 482 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PRDM4Q9UKN5 801 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 PMF1-BGLAPU3KQ54 211 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
HOXB3-204ENST00000465120 IGHV4-30-2A0A087WSY4 118 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 CLIC1O00299 241 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 CD5LO43866 347 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 VAMP5O95183 116 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 AHSA1O95433 338 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 DSCR9P59020 149 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 HOXC5Q00444 222 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 HIKESHIQ53FT3 197 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 MAVSQ7Z434 540 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 MAL2Q969L2 176 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 MOKQ9UQ07 419 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 USH1CQ9Y6N9 552 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
HOXB3-204ENST00000465120 CR1P17927 2039 aa13.52□□□□□ -0.24
HOXB3-204ENST00000465120 A0A096LPI6 279 aa13.52□□□□□ -0.25
HOXB3-204ENST00000465120 ELOA3DA6NLF2 546 aaPredicted RBP13.52□□□□□ -0.25
HOXB3-204ENST00000465120 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
HOXB3-204ENST00000465120 ATP6V1G2-DDX39BF2Z307 99 aa13.52□□□□□ -0.25
HOXB3-204ENST00000465120 FRS3O43559 492 aa13.52□□□□□ -0.25
HOXB3-204ENST00000465120 TLX2O43763 284 aaPredicted RBP13.52□□□□□ -0.25
HOXB3-204ENST00000465120 NUDT7P0C024 238 aa13.52□□□□□ -0.25
HOXB3-204ENST00000465120 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 355.3 ms